RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ZSCAN5DPP0CG00 497 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 GNSP15586 552 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 HLA-DPA1P20036 260 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 CD27P26842 260 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 HNF1BP35680 557 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 LIG3P49916 1009 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 PPP1R7Q15435 360 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 LPAL2Q16609 132 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 QPCTQ16769 361 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 WHAMMP3Q1A5X7 153 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 SETMARQ53H47 684 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 LRRC73Q5JTD7 316 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 LAIR1Q6GTX8 287 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 RANBP10Q6VN20 620 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 SYDE1Q6ZW31 735 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 DPPA4Q7L190 304 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 ARMCX6Q7L4S7 300 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 LINC00523Q86TU6 105 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 SLC41A1Q8IVJ1 513 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 TAB3Q8N5C8 712 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 SLC25A41Q8N5S1 370 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 SPATA4Q8NEY3 305 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 CCHCR1Q8TD31 782 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 ASB12Q8WXK4 309 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 DNASE2BQ8WZ79 361 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 SNX19Q92543 992 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 BIRC7Q96CA5 298 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 MRGPRX2Q96LB1 330 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 MCCC1Q96RQ3 725 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 TRIB3Q96RU7 358 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 WRAP53Q9BUR4 548 aaKnown RBP11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 FICDQ9BVA6 458 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 C1QTNF7Q9BXJ2 289 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 C1QTNF2Q9BXJ5 285 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 SLC17A9Q9BYT1 436 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 DDX47Q9H0S4 455 aaKnown RBP11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 LRRC40Q9H9A6 602 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 MAGEE1Q9HCI5 957 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 KCTD5Q9NXV2 234 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 B4GALT6Q9UBX8 382 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 PCYOX1Q9UHG3 505 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 SMG5Q9UPR3 1016 aaKnown RBP11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 DMTF1Q9Y222 760 aa11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1-202ENST00000337841 KMT2EQ8IZD2 1858 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 A0A1W2PPC4 97 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 PRR5-ARHGAP8B1AHC4 643 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 SLC31A1O15431 190 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 PAK4O96013 591 aaPredicted RBP11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 FGF1P05230 155 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 IGHV4-34P06331 123 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 RETP07949 1114 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 ELFN1P0C7U0 828 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 ZNF30P17039 623 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 MAT2AP31153 395 aaKnown RBP11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 MMP12P39900 470 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 PTGER3P43115 390 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 SEMG2Q02383 582 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 CREB5Q02930 508 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 GALNT3Q14435 633 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 TRIP13Q15645 432 aaPredicted RBP11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 SLC1A5Q15758 541 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 ZNF284Q2VY69 593 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 FAXCQ5TGI0 409 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 NAPEPLDQ6IQ20 393 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 LIPIQ6XZB0 460 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 CYP2U1Q7Z449 544 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 MAATS1Q7Z4T9 603 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 RABEPKQ7Z6M1 372 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 PRUNE1Q86TP1 453 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 SYT12Q8IV01 421 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 KLHDC8BQ8IXV7 354 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 SUMF1Q8NBK3 374 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 MNS1Q8NEH6 495 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 PIGKQ92643 395 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 TBL1YQ9BQ87 522 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 MIR1-1HGQ9H1L0 117 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 HACD3Q9P035 362 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 SUSD2Q9UGT4 822 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 EIF2B4Q9UI10 523 aaKnown RBP11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 GMEB2Q9UKD1 530 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 ITM2BQ9Y287 266 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 PCDHGA5Q9Y5G8 931 aa11.95□□□□□ -0.5
SPTLC1-202ENST00000337841 ZNF318Q5VUA4 2279 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 MUC3AQ02505 3323 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 CAPN8A6NHC0 703 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 PROB1E7EW31 1015 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 PRAMEF26H0Y7S4 382 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 AP3B1O00203 1094 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 PSMD11O00231 422 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 SPINT1O43278 529 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 LATO43561 262 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 HEXIM1O94992 359 aaKnown RBP11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 AP2A1O95782 977 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 ALPIP09923 528 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 ITPKAP23677 461 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 MAOBP27338 520 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 AKT2P31751 481 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 ADRA1AP35348 466 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms