RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PCDH19Q8TAB3 1148 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 ASZ1Q8WWH4 475 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 FIG4Q92562 907 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 TADA1Q96BN2 335 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 TBATAQ96M53 351 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 WRAP53Q9BUR4 548 aaKnown RBP15.07■□□□□ 0
C9orf47-201ENST00000334490 ERVW-1Q9UQF0 538 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 SCN11AQ9UI33 1791 aa15.07■□□□□ 0
C9orf47-201ENST00000334490 INSIG1O15503 277 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 SGTAO43765 313 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 MT-CYBP00156 380 aaPredicted RBP15.06■□□□□ 0
C9orf47-201ENST00000334490 EDNRBP24530 442 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 PTPN4P29074 926 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 TLX1P31314 330 aaPredicted RBP15.06■□□□□ 0
C9orf47-201ENST00000334490 FNBP1LQ5T0N5 605 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 C17orf99Q6UX52 265 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 DNAJC9Q8WXX5 260 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 VPS33AQ96AX1 596 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 NSMCE2Q96MF7 247 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 SIKE1Q9BRV8 207 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 CAB39LQ9H9S4 337 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 FGF18O76093 207 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 AP2A1O95782 977 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 PKMP14618 531 aaKnown RBP15.06■□□□□ 0
C9orf47-201ENST00000334490 IL10RBQ08334 325 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 SPIDRQ14159 915 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 RNF148Q8N7C7 305 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 PXYLP1Q8TE99 480 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 STARD8Q92502 1023 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 EXOSC4Q9NPD3 245 aaKnown RBP15.06■□□□□ 0
C9orf47-201ENST00000334490 TMCO1Q9UM00 188 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 FAM163BP0C2L3 166 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 CSF2RAP15509 400 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 SPAM1P38567 509 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 CSTF3Q12996 717 aaKnown RBP15.06■□□□□ 0
C9orf47-201ENST00000334490 CA9Q16790 459 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 CYP4X1Q8N118 509 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 EFCAB3Q8N7B9 438 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 PRCCQ92733 491 aaPredicted RBP15.06■□□□□ 0
C9orf47-201ENST00000334490 SLC25A23Q9BV35 468 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 CCSER2Q9H7U1 834 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 GULP1Q9UBP9 304 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 TLR6Q9Y2C9 796 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 ACTL7BQ9Y614 415 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 ENPP3O14638 875 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 GATMP50440 423 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 FRG1Q14331 258 aaKnown RBP15.06■□□□□ 0
C9orf47-201ENST00000334490 SCIMPQ6UWF3 145 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 PHYKPLQ8IUZ5 450 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 CPT1BQ92523 772 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 SEPHS2Q99611 448 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 SLC4A5Q9BY07 1137 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 ARMC7Q9H6L4 198 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 GDAP2Q9NXN4 497 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 C4BP0C0L5 1744 aa15.06■□□□□ 0
C9orf47-201ENST00000334490 SCTRP47872 440 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 CCT8P50990 548 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 LRRC4CQ9HCJ2 640 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 TLR9Q9NR96 1032 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 IL1RAPL1Q9NZN1 696 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 TULP2O00295 520 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 CXCR3P49682 368 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 GRSF1Q12849 480 aaKnown RBP eCLIP15.05■□□□□ 0
C9orf47-201ENST00000334490 GPR17Q13304 367 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 UBXN2BQ14CS0 331 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 CCDC85BQ15834 202 aaPredicted RBP15.05■□□□□ 0
C9orf47-201ENST00000334490 ADGRF1Q5T601 910 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 MREGQ8N565 214 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 LEMD2Q8NC56 503 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 ZNF461Q8TAF7 563 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 STYXQ8WUJ0 223 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 VMP1Q96GC9 406 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 SLC39A8Q9C0K1 460 aa15.05■□□□□ 0
C9orf47-201ENST00000334490 KRCC1Q9NPI7 259 aaPredicted RBP15.05■□□□□ 0
C9orf47-201ENST00000334490 CRYBG1Q9Y4K1 1723 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 H0Y858 1186 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 WDR47O94967 919 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 NUDT17P0C025 328 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 FSHRP23945 695 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 PRKAG1P54619 331 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 BST1Q10588 318 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 TRAF2Q12933 501 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 TMEM110Q86TL2 294 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 BTN2A2Q8WVV5 523 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 OLFM3Q96PB7 478 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 ABCG4Q9H172 646 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 CLIC5Q9NZA1 410 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 CCL22O00626 93 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 HCRTO43612 131 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 IFNA16P05015 189 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 CDH13P55290 713 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 PEX6Q13608 980 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 DLG2Q15700 870 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 ZCCHC8Q6NZY4 707 aaKnown RBP15.05■□□□□ -0
C9orf47-201ENST00000334490 CERS6Q6ZMG9 384 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 GPRIN3Q6ZVF9 776 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 UBE2R2Q712K3 238 aaPredicted RBP15.05■□□□□ -0
C9orf47-201ENST00000334490 OSTM1Q86WC4 334 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 TMPRSS6Q8IU80 811 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 TMEM132CQ8N3T6 1108 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms