RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 AOC1P19801 751 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 MORF4L2Q15014 288 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 LYSMD3Q7Z3D4 306 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 TTC7BQ86TV6 843 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 MAML2Q8IZL2 1156 aaPredicted RBP16.58■□□□□ 0.25
SHOX-201ENST00000334060 PELI3Q8N2H9 469 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 HDDC3Q8N4P3 179 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 PAF1Q8N7H5 531 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 TMIEQ8NEW7 156 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 TUBGCP5Q96RT8 1024 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 WRAP53Q9BUR4 548 aaKnown RBP16.58■□□□□ 0.25
SHOX-201ENST00000334060 BPIFA1Q9NP55 256 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 EIF2B3Q9NR50 452 aaKnown RBP16.58■□□□□ 0.25
SHOX-201ENST00000334060 CHRAC1Q9NRG0 131 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 A0A0J9YYE9 177 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 ERICH4A6NGS2 130 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 TRBC1P01850 177 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 PRNPP04156 253 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 PRSS56P0CW18 603 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 ADRB3P13945 408 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 GM2AP17900 193 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 ACSL1P33121 698 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 RALGDSQ12967 914 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 CALCOCO2Q13137 446 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 ZNF776Q68DI1 518 aaPredicted RBP16.58■□□□□ 0.24
SHOX-201ENST00000334060 LRRC8BQ6P9F7 803 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 OR13C4Q8NGS5 318 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 KCNV2Q8TDN2 545 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 SIPA1Q96FS4 1042 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 SIGLEC10Q96LC7 697 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 C9orf72Q96LT7 481 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 LRRC4CQ9HCJ2 640 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 SLC17A6Q9P2U8 582 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 CHMP2BQ9UQN3 213 aa16.58■□□□□ 0.24
SHOX-201ENST00000334060 FNDC3AQ9Y2H6 1198 aaKnown RBP16.58■□□□□ 0.24
SHOX-201ENST00000334060 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.57■□□□□ 0.24
SHOX-201ENST00000334060 TSPAN11A1L157 253 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 SOCS5O75159 536 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 ITGB7P26010 798 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 DRG2P55039 364 aaKnown RBP16.57■□□□□ 0.24
SHOX-201ENST00000334060 TMPRSS15P98073 1019 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 SEPT6Q14141 434 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 CRTC1Q6UUV9 634 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 CCNI2Q6ZMN8 369 aaPredicted RBP16.57■□□□□ 0.24
SHOX-201ENST00000334060 TRMT11Q7Z4G4 463 aaKnown RBP16.57■□□□□ 0.24
SHOX-201ENST00000334060 PGBD3Q8N328 593 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 CCHCR1Q8TD31 782 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 NAT14Q8WUY8 206 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 KLK6Q92876 244 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 PBXIP1Q96AQ6 731 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 FBXL12Q9NXK8 326 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 CYP8B1Q9UNU6 501 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 LRRK1Q38SD2 2015 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 FAM47DPA6NHR8 397 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 NPC1O15118 1278 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 GPR37L1O60883 481 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 ELK3P41970 407 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 TPMTP51580 245 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 ARSDP51689 593 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 EPHB1P54762 984 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 RAD51Q06609 339 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 PDIA2Q13087 525 aaKnown RBP16.57■□□□□ 0.24
SHOX-201ENST00000334060 SRSF5Q13243 272 aaKnown RBP16.57■□□□□ 0.24
SHOX-201ENST00000334060 NAPEPLDQ6IQ20 393 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 ERN2Q76MJ5 926 aaKnown RBP16.57■□□□□ 0.24
SHOX-201ENST00000334060 SYNPOQ8N3V7 929 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 SPEM1Q8N4L4 309 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 ZCCHC9Q8N567 271 aaKnown RBP16.57■□□□□ 0.24
SHOX-201ENST00000334060 DEFB119Q8N690 84 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 MCUQ8NE86 351 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 TSTD1Q8NFU3 115 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 MFSD3Q96ES6 412 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 ZNF641Q96N77 438 aaPredicted RBP16.57■□□□□ 0.24
SHOX-201ENST00000334060 FCRL3Q96P31 734 aaPredicted RBP16.57■□□□□ 0.24
SHOX-201ENST00000334060 NELL2Q99435 816 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 PABPC3Q9H361 631 aaKnown RBP16.57■□□□□ 0.24
SHOX-201ENST00000334060 CAAP1Q9H8G2 361 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 CD84Q9UIB8 345 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 SLCO1B1Q9Y6L6 691 aa16.57■□□□□ 0.24
SHOX-201ENST00000334060 EML5Q05BV3 1969 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 OR51F1A6NGY5 319 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 UPK3BL1B0FP48 263 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 GOLGA8KD6RF30 607 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 UPK3BL2E5RIL1 263 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 GOLGA8TH3BQL2 631 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 LDB2O43679 373 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 NMBRP28336 390 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 RPS9P46781 194 aaKnown RBP16.56■□□□□ 0.24
SHOX-201ENST00000334060 PPP2CBP62714 309 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 PPP2CAP67775 309 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 CDH17Q12864 832 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 SEL1L3Q68CR1 1132 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 LRRC66Q68CR7 880 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 HOOK3Q86VS8 718 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 IFT20Q8IY31 132 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 TTC30BQ8N4P2 665 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 UHMK1Q8TAS1 419 aaKnown RBP16.56■□□□□ 0.24
SHOX-201ENST00000334060 GANCQ8TET4 914 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 CCDC97Q96F63 343 aaPredicted RBP16.56■□□□□ 0.24
SHOX-201ENST00000334060 SUDS3Q9H7L9 328 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms