RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 ELFN1P0C7U0 828 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 CYP2A6P11509 494 aaPredicted RBP15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 C6P13671 934 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 CD38P28907 300 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 PTPRRQ15256 657 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 SLC14A2Q15849 920 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 ANKRD20A2Q5SQ80 823 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 ANKRD20A1Q5TYW2 823 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 ANKRD20A3Q5VUR7 823 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 KDELC2Q7Z4H8 507 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 NDUFAF2Q8N183 169 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 CCDC110Q8TBZ0 833 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 MAIP1Q8WWC4 291 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 PBKQ96KB5 322 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 SPATA13Q96N96 652 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 SMIM14Q96QK8 99 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 TMEM121Q9BTD3 319 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 C1QTNF2Q9BXJ5 285 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 GBA3Q9H227 469 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 USP29Q9HBJ7 922 aa15.97■□□□□ 0.15
CCDC28A-201ENST00000332797 RIF1Q5UIP0 2472 aaKnown RBP15.96■□□□□ 0.15
CCDC28A-201ENST00000332797 LAMA1P25391 3075 aa15.96■□□□□ 0.15
CCDC28A-201ENST00000332797 NPIPB15A6NHN6 443 aaPredicted RBP15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 ENGP17813 658 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 VIPR1P32241 457 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 GRIA4P48058 902 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 C21orf59P57076 290 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 RPL26P61254 145 aaKnown RBP15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 GRIK2Q13002 908 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 SNX1Q13596 522 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 GALNT3Q14435 633 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 STAT4Q14765 748 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 SIX1Q15475 284 aaPredicted RBP15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 TADA1Q96BN2 335 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 RMDN1Q96DB5 314 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 IFT43Q96FT9 208 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 SCRN2Q96FV2 425 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 FCRL5Q96RD9 977 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 MCCC1Q96RQ3 725 aaPredicted RBP15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 OSBPL9Q96SU4 736 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 EDEM2Q9BV94 578 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 GTPBP2Q9BX10 602 aaKnown RBP15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 ADGRE3Q9BY15 652 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 RXFP3Q9NSD7 469 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 FAM153AQ9UHL3 310 aa15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 RPL26L1Q9UNX3 145 aaKnown RBP15.96■□□□□ 0.14
CCDC28A-201ENST00000332797 PIEZO1Q92508 2521 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 GVINP1Q7Z2Y8 2422 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 TRPM6Q9BX84 2022 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 FAM186AA6NE01 2351 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 PCDH15Q96QU1 1955 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 A0A0J9YYE9 177 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 A0A1W2PR77 199 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 CFAP69A5D8W1 941 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 ARHGAP33O14559 1287 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 RAD51BO15315 384 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 LZTS3O60299 673 aaPredicted RBP15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 GDF9O60383 454 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 OPHN1O60890 802 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 TRBC1P01850 177 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 WNT1P04628 370 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 SYPP08247 313 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 HNF1BP35680 557 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 GDF10P55107 478 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 CLDN2P57739 230 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 LMNB2Q03252 620 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 CDK18Q07002 472 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 OASLQ15646 514 aaKnown RBP15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 CNGA3Q16281 694 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 DENND2CQ68D51 928 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 LIPIQ6XZB0 460 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 ARHGEF18Q6ZSZ5 1173 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 TSPAN33Q86UF1 283 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 TMEM145Q8NBT3 493 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 ASB12Q8WXK4 309 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 OXNAD1Q96HP4 312 aaPredicted RBP15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 MS4A14Q96JA4 679 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 TRIB3Q96RU7 358 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 WDR24Q96S15 920 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 C1QTNF7Q9BXJ2 289 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 SNX12Q9UMY4 172 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 ZNF148Q9UQR1 794 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 ANKRD6Q9Y2G4 727 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 PPIL1Q9Y3C6 166 aa15.95■□□□□ 0.14
CCDC28A-201ENST00000332797 DOCK9Q9BZ29 2069 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 A0A0U1RQS6 177 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 C5orf60A6NFR6 353 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 CAPN8A6NHC0 703 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 GOLGA8CPA6NN73 597 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 H0Y8X5 98 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 VILLO15195 856 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 HEXIM1O94992 359 aaKnown RBP15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 LHCGRP22888 699 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 PSMB4P28070 264 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 TNNT3P45378 269 aaPredicted RBP15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 ATXN3P54252 364 aaPredicted RBP15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 WNT3AP56704 352 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 BNC1Q01954 994 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 ARHGEF7Q14155 803 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms