RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 CNTNAP2Q9UHC6 1331 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 ISPDA4D126 451 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 C9IYK1 514 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 GAS2O43903 313 aaKnown RBP11.91□□□□□ -0.5
SHMT2-201ENST00000328923 VAPBO95292 243 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 AMHP03971 560 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 ELK4P28324 431 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 ARRB2P32121 409 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 SNRNP35Q16560 246 aaKnown RBP11.91□□□□□ -0.5
SHMT2-201ENST00000328923 CTF1Q16619 201 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 NXNL2Q5VZ03 156 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 MBLAC2Q68D91 279 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 ERAP2Q6P179 960 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 B3GNT9Q6UX72 402 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 ERMP1Q7Z2K6 904 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 ADCK1Q86TW2 530 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 FAM83AQ86UY5 434 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 PHF13Q86YI8 300 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-201ENST00000328923 PGAM4Q8N0Y7 254 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 ANKFN1Q8N957 763 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 GALNT11Q8NCW6 608 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 ST8SIA2Q92186 375 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 CPT1BQ92523 772 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 LPGAT1Q92604 370 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 CEP19Q96LK0 163 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 SORT1Q99523 831 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 ACO2Q99798 780 aaKnown RBP11.91□□□□□ -0.5
SHMT2-201ENST00000328923 BTBD2Q9BX70 525 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 DGCR6LQ9BY27 220 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 ADAMTS10Q9H324 1103 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 DIABLOQ9NR28 239 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 RNF112Q9ULX5 631 aa11.91□□□□□ -0.5
SHMT2-201ENST00000328923 TCRBV7S3A2A0A539 114 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 ZBBXA8MT70 800 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 TISP43B9A030 160 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 TCP10L2B9ZVM9 353 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 EXTL3O43909 919 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 RFPL1O75677 317 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 IMPDH1P20839 514 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 CLK1P49759 484 aaKnown RBP11.9□□□□□ -0.5
SHMT2-201ENST00000328923 LSM3P62310 102 aaKnown RBP11.9□□□□□ -0.5
SHMT2-201ENST00000328923 JAG1P78504 1218 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 GHRHRQ02643 423 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 GEN1Q17RS7 908 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 SLC9B1Q4ZJI4 515 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 ATF7IP2Q5U623 682 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 TTC39BQ5VTQ0 682 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-201ENST00000328923 SPOCD1Q6ZMY3 1216 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 GDPD3Q7L5L3 318 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 PDIK1LQ8N165 341 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 CCDC185Q8N715 623 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 RHOXF1Q8NHV9 184 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 CPA5Q8WXQ8 436 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 FBXW5Q969U6 566 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 KCTD14Q9BQ13 255 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-201ENST00000328923 LXNQ9BS40 222 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 WACQ9BTA9 647 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 ZC4H2Q9NQZ6 224 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 WRAP73Q9P2S5 460 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-201ENST00000328923 TEKT2Q9UIF3 430 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 hCG_1818297A0A087WSY0 165 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 CLRN2A0PK11 232 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 SGK1O00141 431 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 CHMP2AO43633 222 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 ZNF780AO75290 641 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-201ENST00000328923 FGF18O76093 207 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 PTTG1O95997 202 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 PDGFAP04085 211 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 KRT1P04264 644 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 RBP1P09455 135 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 FGF3P11487 239 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-201ENST00000328923 HOXB1P14653 301 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-201ENST00000328923 DNAJB2P25686 324 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 GTF2E2P29084 291 aaKnown RBP11.9□□□□□ -0.5
SHMT2-201ENST00000328923 ACTR2P61160 394 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 ABCE1P61221 599 aaKnown RBP11.9□□□□□ -0.5
SHMT2-201ENST00000328923 RHDQ02161 417 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 MGAT3Q09327 533 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 TOP3AQ13472 1001 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-201ENST00000328923 ACAP2Q15057 778 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 LEXMQ3ZCV2 418 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 FAM209BQ5JX69 171 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 CCNJQ5T5M9 372 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 CORO6Q6QEF8 472 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 PADI6Q6TGC4 694 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 MFSD7Q6UXD7 560 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 LINC00523Q86TU6 105 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 WDR49Q8IV35 697 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 PPM1NQ8N819 430 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 GLB1L3Q8NCI6 653 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-201ENST00000328923 GMCL1P1Q8NEA9 526 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 RAET1EQ8TD07 263 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 TRPM4Q8TD43 1214 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 TAS1R2Q8TE23 839 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 BTN2A3PQ96KV6 586 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 VPS33BQ9H267 617 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 GLTPQ9NZD2 209 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 ADA2Q9NZK5 511 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 PCDHGC3Q9UN70 934 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms