RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 HABP4Q5JVS0 413 aaKnown RBP16.66■□□□□ 0.26
SSH3-201ENST00000308127 SDHAF4Q5VUM1 108 aa16.66■□□□□ 0.26
SSH3-201ENST00000308127 KLHL35Q6PF15 583 aa16.66■□□□□ 0.26
SSH3-201ENST00000308127 DDI1Q8WTU0 396 aa16.66■□□□□ 0.26
SSH3-201ENST00000308127 DPF3Q92784 378 aa16.66■□□□□ 0.26
SSH3-201ENST00000308127 MYLPFQ96A32 169 aa16.66■□□□□ 0.26
SSH3-201ENST00000308127 PABPC5Q96DU9 382 aaKnown RBP16.66■□□□□ 0.26
SSH3-201ENST00000308127 FAM124BQ9H5Z6 455 aaPredicted RBP16.66■□□□□ 0.26
SSH3-201ENST00000308127 NT5MQ9NPB1 228 aa16.66■□□□□ 0.26
SSH3-201ENST00000308127 TMLHEQ9NVH6 421 aa16.66■□□□□ 0.26
SSH3-201ENST00000308127 PPP2R3BQ9Y5P8 575 aa16.66■□□□□ 0.26
SSH3-201ENST00000308127 RNF103-CHMP3A0A140T963 221 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 NPHS1O60500 1241 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 PAGE1O75459 146 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 PENKP01210 267 aaPredicted RBP16.65■□□□□ 0.26
SSH3-201ENST00000308127 ZNF23P17027 643 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 HSPA13P48723 471 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 WNT3AP56704 352 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 PLIN5Q00G26 463 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 SCAPQ12770 1279 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 SQLEQ14534 574 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 C16orf72Q14CZ0 275 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 LINC00523Q86TU6 105 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 NAT16Q8N8M0 369 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 NUDT8Q8WV74 236 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 DNAI2Q9GZS0 605 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 NAA50Q9GZZ1 169 aaKnown RBP16.65■□□□□ 0.26
SSH3-201ENST00000308127 AKTIPQ9H8T0 292 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 TSR3Q9UJK0 312 aaKnown RBP16.65■□□□□ 0.26
SSH3-201ENST00000308127 FAF1Q9UNN5 650 aaPredicted RBP16.65■□□□□ 0.26
SSH3-201ENST00000308127 H3BMM5 538 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 BRCC3P46736 316 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 DCTN2Q13561 401 aaKnown RBP16.65■□□□□ 0.26
SSH3-201ENST00000308127 IHHQ14623 411 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 PLCL1Q15111 1095 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 EPHX4Q8IUS5 362 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 TOP6BLQ8N6T0 577 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 C2CD4AQ8NCU7 369 aaPredicted RBP16.65■□□□□ 0.26
SSH3-201ENST00000308127 GPRC5AQ8NFJ5 357 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 DNAJB14Q8TBM8 379 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 VPS33AQ96AX1 596 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 PTERQ96BW5 349 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 GSTO2Q9H4Y5 243 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 FNDC3AQ9Y2H6 1198 aaKnown RBP16.65■□□□□ 0.26
SSH3-201ENST00000308127 AAR2Q9Y312 384 aaKnown RBP16.65■□□□□ 0.26
SSH3-201ENST00000308127 COL1A2P08123 1366 aa16.65■□□□□ 0.26
SSH3-201ENST00000308127 A0A0J9YYE9 177 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 LINC00032P0C843 101 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 CAPN3P20807 821 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 CD86P42081 329 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 PRKAA2P54646 552 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 HECTD2Q5U5R9 776 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 POTEHQ6S545 545 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 GPC2Q8N158 579 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 ESAMQ96AP7 390 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 SLC9A7Q96T83 725 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 OSBPL11Q9BXB4 747 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 VTA1Q9NP79 307 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 PLK2Q9NYY3 685 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 EVLQ9UI08 416 aaPredicted RBP16.64■□□□□ 0.25
SSH3-201ENST00000308127 OTOFQ9HC10 1997 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 NCF1BA6NI72 391 aaPredicted RBP16.64■□□□□ 0.25
SSH3-201ENST00000308127 NCF1CA8MVU1 366 aaPredicted RBP16.64■□□□□ 0.25
SSH3-201ENST00000308127 J3KR12 359 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 MTSS1O43312 755 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 HSPA1AP0DMV8 641 aaKnown RBP16.64■□□□□ 0.25
SSH3-201ENST00000308127 HSPA1BP0DMV9 641 aaKnown RBP16.64■□□□□ 0.25
SSH3-201ENST00000308127 NCF1P14598 390 aaPredicted RBP16.64■□□□□ 0.25
SSH3-201ENST00000308127 SLC7A1P30825 629 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 SCNN1GP51170 649 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 PSMD7P51665 324 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 SH3BP2P78314 561 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 TXNL4AP83876 142 aaKnown RBP16.64■□□□□ 0.25
SSH3-201ENST00000308127 RABL3Q5HYI8 236 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 KLC3Q6P597 504 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 TTC33Q6PID6 262 aaPredicted RBP16.64■□□□□ 0.25
SSH3-201ENST00000308127 SHCBP1Q8NEM2 672 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 HDAC10Q969S8 669 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 PBXIP1Q96AQ6 731 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 FCRL2Q96LA5 508 aaPredicted RBP16.64■□□□□ 0.25
SSH3-201ENST00000308127 MEAF6Q9HAF1 191 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 CNGB3Q9NQW8 809 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 CD300AQ9UGN4 299 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 OAZ3Q9UMX2 235 aa16.64■□□□□ 0.25
SSH3-201ENST00000308127 TCRBV3S1A0A5B6 114 aa16.63■□□□□ 0.25
SSH3-201ENST00000308127 HHLA1C9JL84 531 aa16.63■□□□□ 0.25
SSH3-201ENST00000308127 UBXN8O00124 270 aa16.63■□□□□ 0.25
SSH3-201ENST00000308127 CXCL11O14625 94 aa16.63■□□□□ 0.25
SSH3-201ENST00000308127 STAMBPO95630 424 aa16.63■□□□□ 0.25
SSH3-201ENST00000308127 HNRNPCP07910 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
SSH3-201ENST00000308127 LTA4HP09960 611 aaKnown RBP16.63■□□□□ 0.25
SSH3-201ENST00000308127 HADHAP40939 763 aa16.63■□□□□ 0.25
SSH3-201ENST00000308127 NHSL2Q5HYW2 709 aa16.63■□□□□ 0.25
SSH3-201ENST00000308127 ERLEC1Q96DZ1 483 aa16.63■□□□□ 0.25
SSH3-201ENST00000308127 C19orf60Q96EN9 201 aa16.63■□□□□ 0.25
SSH3-201ENST00000308127 HAUS8Q9BT25 410 aa16.63■□□□□ 0.25
SSH3-201ENST00000308127 MID1IP1Q9NPA3 183 aa16.63■□□□□ 0.25
SSH3-201ENST00000308127 NSMCE4AQ9NXX6 385 aa16.63■□□□□ 0.25
SSH3-201ENST00000308127 RRN3Q9NYV6 651 aa16.63■□□□□ 0.25
SSH3-201ENST00000308127 MAP10Q9P2G4 905 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms