RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 LBPP18428 481 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 AKR1D1P51857 326 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 RBBP4Q09028 425 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 IRAK1BP1Q5VVH5 260 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 ARMC6Q6NXE6 501 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 TMEM154Q6P9G4 183 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 PMM1Q92871 262 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 ERMAPQ96PL5 475 aaPredicted RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 LBHD1Q9BQE6 289 aaPredicted RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 DEFB129Q9H1M3 183 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 HACL1Q9UJ83 578 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 NHSL1Q5SYE7 1610 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 ANXA8P13928 327 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 NR4A2P43354 598 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 PTPN9P43378 593 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 FASTKQ14296 549 aaKnown RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 IL23RQ5VWK5 629 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 ARHGAP17Q68EM7 881 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 CAPN12Q6ZSI9 719 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 TSPAN14Q8NG11 270 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 EPS8L1Q8TE68 723 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 TAS2R8Q9NYW2 309 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 MGAT4AQ9UM21 535 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 SSR3Q9UNL2 185 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 SCN7AQ01118 1682 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 ZNF879B4DU55 563 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 SRGAP2O75044 1071 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 TRIP10Q15642 601 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 CYP2A13Q16696 494 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 ZBED5Q49AG3 693 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 SCARA5Q6ZMJ2 495 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 SMIM5Q71RC9 77 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 SV2AQ7L0J3 742 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 REPS2Q8NFH8 660 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 ACTL9Q8TC94 416 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 PHF10Q8WUB8 498 aaKnown RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 ITFG2Q969R8 447 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 PLD4Q96BZ4 506 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 TTLL2Q9BWV7 592 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 AGO4Q9HCK5 861 aaKnown RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 WWOXQ9NZC7 414 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 SLC27A6Q9Y2P4 619 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 SNX24Q9Y343 169 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 VAPBO95292 243 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 TACSTD2P09758 323 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 CHI3L2Q15782 390 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 TCEAL5Q5H9L2 206 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 CHSY3Q70JA7 882 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 TRPV1Q8NER1 839 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 NMD3Q96D46 503 aaKnown RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 OTUB2Q96DC9 234 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 C17orf80Q9BSJ5 609 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 MTFR1LQ9H019 292 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 ASCC2Q9H1I8 757 aaPredicted RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 SCUBE2Q9NQ36 999 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.03□□□□□ -1.76
USH2A-201ENST00000307340 VPS28Q9UK41 221 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 GJA3Q9Y6H8 435 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 DFFAO00273 331 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 CLDN11O75508 207 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 TSPAN8P19075 237 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 HTR1BP28222 390 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 CDK9P50750 372 aaKnown RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 ZNF169Q14929 603 aaPredicted RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 PARP8Q8N3A8 854 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 FBXO36Q8NEA4 188 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 SEC14L1Q92503 715 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 CENPNQ96H22 339 aaPredicted RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 S100A13Q99584 98 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 SERHL2Q9H4I8 314 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 SERHLQ9NQF3 203 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 RIMKLBQ9ULI2 386 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 DAGLAQ9Y4D2 1042 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 A0A0X1KG70 313 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 G3V2T6 193 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 CATP04040 527 aaKnown RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 PFKMP08237 780 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 GPR33Q49SQ1 333 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 ACCSLQ4AC99 568 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 NRAPQ86VF7 1730 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 PLCZ1Q86YW0 608 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 TTC29Q8NA56 475 aaPredicted RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 RNFT2Q96EX2 444 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 SPOCK3Q9BQ16 436 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 LTBP3Q9NS15 1303 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 AGPAT5Q9NUQ2 364 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 TAF6LQ9Y6J9 622 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 NFIBO00712 420 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 UBXN7O94888 489 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 ALDH2P05091 517 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 C8BP07358 591 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 COX7A2P14406 83 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 PKMP14618 531 aaKnown RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 CENPLQ8N0S6 344 aaPredicted RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 SH3RF3Q8TEJ3 882 aaPredicted RBP4.03□□□□□ -1.76
USH2A-201ENST00000307340 NCKAP1Q9Y2A7 1128 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 PCDHGA11Q9Y5H2 935 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 MYMKA6NI61 221 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 UGDHO60701 494 aa4.03□□□□□ -1.76
USH2A-201ENST00000307340 ZNF30P17039 623 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms