RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SLCO2A1Q92959 643 aa24.59■■□□□ 1.53
HOXC9-201ENST00000303450 HSPA12BQ96MM6 686 aa24.59■■□□□ 1.53
HOXC9-201ENST00000303450 MCCC1Q96RQ3 725 aaPredicted RBP24.59■■□□□ 1.53
HOXC9-201ENST00000303450 KRT12Q99456 494 aa24.59■■□□□ 1.53
HOXC9-201ENST00000303450 WRAP53Q9BUR4 548 aaKnown RBP24.59■■□□□ 1.53
HOXC9-201ENST00000303450 EPC1Q9H2F5 836 aa24.59■■□□□ 1.53
HOXC9-201ENST00000303450 B4GALT6Q9UBX8 382 aa24.59■■□□□ 1.53
HOXC9-201ENST00000303450 RAB23Q9ULC3 237 aa24.59■■□□□ 1.53
HOXC9-201ENST00000303450 TRPM6Q9BX84 2022 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 A0A1W2PQU0 124 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 METTL12A8MUP2 240 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 MEI4A8MW99 385 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 A8MX80 341 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 AGTP01019 485 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 HNF1BP35680 557 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 DHPSP49366 369 aaPredicted RBP24.58■■□□□ 1.53
HOXC9-201ENST00000303450 PPP2CBP62714 309 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 RPS21P63220 83 aaKnown RBP24.58■■□□□ 1.53
HOXC9-201ENST00000303450 PPP2CAP67775 309 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 BASP1P80723 227 aaKnown RBP24.58■■□□□ 1.53
HOXC9-201ENST00000303450 DR1Q01658 176 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 C2orf54Q08AI8 447 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 GPS1Q13098 491 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 TMEM52BQ4KMG9 183 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 KIAA1161Q6NSJ0 714 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 DPPA4Q7L190 304 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 ARMCX6Q7L4S7 300 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 ZNF572Q7Z3I7 529 aaPredicted RBP24.58■■□□□ 1.53
HOXC9-201ENST00000303450 TRIM69Q86WT6 500 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 HORMAD1Q86X24 394 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 KLHDC8BQ8IXV7 354 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 SLC25A41Q8N5S1 370 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 SNX19Q92543 992 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 LRRC40Q9H9A6 602 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 FAM86C1Q9NVL1 165 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 NEU2Q9Y3R4 380 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 GON4LQ3T8J9 2241 aa24.58■■□□□ 1.53
HOXC9-201ENST00000303450 ERI2A8K979 691 aaKnown RBP24.57■■□□□ 1.52
HOXC9-201ENST00000303450 AP2A1O95782 977 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 HLA-DPA1P20036 260 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 MAT2AP31153 395 aaKnown RBP24.57■■□□□ 1.52
HOXC9-201ENST00000303450 VIPR1P32241 457 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 ADRA1AP35348 466 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 CCR5P51681 352 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 SEMA5AQ13591 1074 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 SPARCL1Q14515 664 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 SLC1A5Q15758 541 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 SIRPB2Q5JXA9 342 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 DNTTIP2Q5QJE6 756 aaKnown RBP24.57■■□□□ 1.52
HOXC9-201ENST00000303450 SYCP2LQ5T4T6 812 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 KCTD11Q693B1 232 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 SLC41A1Q8IVJ1 513 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 BIRC7Q96CA5 298 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 SMIM14Q96QK8 99 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 TBL1YQ9BQ87 522 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 APOL2Q9BQE5 337 aa24.57■■□□□ 1.52
HOXC9-201ENST00000303450 TPX2Q9ULW0 747 aaKnown RBP24.57■■□□□ 1.52
HOXC9-201ENST00000303450 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.57■■□□□ 1.52
HOXC9-201ENST00000303450 CAPN8A6NHC0 703 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 NPIPB15A6NHN6 443 aaPredicted RBP24.56■■□□□ 1.52
HOXC9-201ENST00000303450 MMP20O60882 483 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 ATXN1LP0C7T5 689 aaKnown RBP24.56■■□□□ 1.52
HOXC9-201ENST00000303450 PTGER3P43115 390 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 PTGIRP43119 386 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 CHRNA4P43681 627 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 ARHGEF7Q14155 803 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 PTPRRQ15256 657 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 LPAL2Q16609 132 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 SEL1L3Q68CR1 1132 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 RANBP10Q6VN20 620 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 CCHCR1Q8TD31 782 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 ZFR2Q9UPR6 939 aaKnown RBP24.56■■□□□ 1.52
HOXC9-201ENST00000303450 IGLON5A6NGN9 336 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 USP12O75317 370 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 FGF1P05230 155 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 IGHV4-34P06331 123 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 APRTP07741 180 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 ELFN1P0C7U0 828 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 LIG3P49916 1009 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 RALGDSQ12967 914 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 OLIG2Q13516 323 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 DHX34Q14147 1143 aaKnown RBP24.56■■□□□ 1.52
HOXC9-201ENST00000303450 WDR45BQ5MNZ6 344 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 LYSMD4Q5XG99 296 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 NAPEPLDQ6IQ20 393 aa24.56■■□□□ 1.52
HOXC9-201ENST00000303450 SYDE1Q6ZW31 735 aaPredicted RBP24.56■■□□□ 1.52
HOXC9-201ENST00000303450 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.55■■□□□ 1.52
HOXC9-201ENST00000303450 SGCGQ13326 291 aa24.55■■□□□ 1.52
HOXC9-201ENST00000303450 PTK6Q13882 451 aa24.55■■□□□ 1.52
HOXC9-201ENST00000303450 TMEM259Q4ZIN3 620 aa24.55■■□□□ 1.52
HOXC9-201ENST00000303450 LINC00523Q86TU6 105 aa24.55■■□□□ 1.52
HOXC9-201ENST00000303450 RGL4Q8IZJ4 473 aa24.55■■□□□ 1.52
HOXC9-201ENST00000303450 MNS1Q8NEH6 495 aa24.55■■□□□ 1.52
HOXC9-201ENST00000303450 KLK6Q92876 244 aa24.55■■□□□ 1.52
HOXC9-201ENST00000303450 LYSMD1Q96S90 227 aa24.55■■□□□ 1.52
HOXC9-201ENST00000303450 SRPK1Q96SB4 655 aaKnown RBP24.55■■□□□ 1.52
HOXC9-201ENST00000303450 SEMA4AQ9H3S1 761 aa24.55■■□□□ 1.52
HOXC9-201ENST00000303450 ASIC3Q9UHC3 531 aa24.55■■□□□ 1.52
HOXC9-201ENST00000303450 SMG5Q9UPR3 1016 aaKnown RBP24.55■■□□□ 1.52
HOXC9-201ENST00000303450 DOCK9Q9BZ29 2069 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms