RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 REPS2Q8NFH8 660 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 C1QTNF1Q9BXJ1 281 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 ANKHQ9HCJ1 492 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 CD320Q9NPF0 282 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 SCAF8Q9UPN6 1271 aaKnown RBP7.67□□□□□ -1.18
SF3B3-201ENST00000302516 MAN2B2Q9Y2E5 1009 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 PCDHB12Q9Y5F1 795 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 LYVE1Q9Y5Y7 322 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 URADA6NGE7 173 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 POLR2EP19388 210 aaKnown RBP7.67□□□□□ -1.18
SF3B3-201ENST00000302516 LCN1P1Q5VSP4 162 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 C1orf186Q6ZWK4 172 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 ACOT12Q8WYK0 555 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 DEFB129Q9H1M3 183 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 ATP13A3Q9H7F0 1226 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 OR12D3Q9UGF7 316 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 TNS2Q63HR2 1409 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.67□□□□□ -1.18
SF3B3-201ENST00000302516 CAPN15O75808 1086 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 BPGMP07738 259 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 ZSWIM2Q8NEG5 633 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 RFKQ969G6 155 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 FAM136AQ96C01 138 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 CELF6Q96J87 481 aaKnown RBP7.67□□□□□ -1.18
SF3B3-201ENST00000302516 BLOC1S4Q9NUP1 217 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 CABYRO75952 493 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 BIKQ13323 160 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 SGCGQ13326 291 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 WDR59Q6PJI9 974 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 CDYL2Q8N8U2 506 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 SYNDIG1Q9H7V2 258 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 SPG21Q9NZD8 308 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 ANKDD1BA6NHY2 528 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 LACTBL1A8MY62 500 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 E5RJQ4 531 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 GSC2O15499 205 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 OR6A2O95222 327 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 AMPD1P23109 780 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 ACTR3P61158 418 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 RPTNQ6XPR3 784 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 ADAMDEC1O15204 470 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 DDX3YO15523 660 aaKnown RBP7.67□□□□□ -1.18
SF3B3-201ENST00000302516 REM1O75628 298 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 VTNP04004 478 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 GPD2P43304 727 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 SNRPD1P62314 119 aaKnown RBP7.67□□□□□ -1.18
SF3B3-201ENST00000302516 RHAGQ02094 409 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 PTGR2Q8N8N7 351 aaPredicted RBP7.67□□□□□ -1.18
SF3B3-201ENST00000302516 SLC44A1Q8WWI5 657 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 LHX5Q9H2C1 402 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 TRPS1Q9UHF7 1281 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 DHRS7Q9Y394 339 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 MEGF6O75095 1541 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 FAM86B1E9PN63 330 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 TEX46H3BTG2 121 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 SIN3BO75182 1162 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 FAM86B2P0C5J1 330 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 ZNF286BP0CG31 522 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 THRBP10828 461 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 PSMA1P25786 263 aaKnown RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 CD86P42081 329 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 CLK3P49761 638 aaKnown RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 TGFB2P61812 414 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 ALYREFQ86V81 257 aaKnown RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 UNC5BQ8IZJ1 945 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 RNF148Q8N7C7 305 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 SHC3Q92529 594 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 KLQ9UEF7 1012 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 OAFQ86UD1 273 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 FBXO16Q8IX29 292 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 C12orf56Q8IXR9 622 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 CSGALNACT1Q8TDX6 532 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 HPS1Q92902 700 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 TBCDQ9BTW9 1192 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 TKTL2Q9H0I9 626 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 GIN1Q9NXP7 522 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 UPB1Q9UBR1 384 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 SLC9A3R1O14745 358 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 ACADMP11310 421 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 TUFMP49411 452 aaKnown RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 FKBP1CQ5VVH2 108 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 FAM183BPQ6ZVS7 135 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 RCN3Q96D15 328 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 KLHL32Q96NJ5 620 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 OSGEPL1Q9H4B0 414 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 MCUBQ9NWR8 336 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 PTGFRNQ9P2B2 879 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 ZNF510Q9Y2H8 683 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 RIC1Q4ADV7 1423 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 GNRH1P01148 92 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 AP1S2P56377 157 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 MTAPQ13126 283 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 PLET1Q6UQ28 207 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 FAM20CQ8IXL6 584 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 OR52K1Q8NGK4 314 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 GJD4Q96KN9 370 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 RNF157Q96PX1 679 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 OR52E6Q96RD3 313 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 TLL2Q9Y6L7 1015 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms