RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 AMACRQ9UHK6 382 aa11.33□□□□□ -0.6
CLCC1-201ENST00000302500 PCDHGC4Q9Y5F7 938 aa11.33□□□□□ -0.6
CLCC1-201ENST00000302500 PCDHGA1Q9Y5H4 931 aa11.33□□□□□ -0.6
CLCC1-201ENST00000302500 A0A0U1RQJ8 604 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 BTNL10A8MVZ5 291 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 PJA2O43164 708 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 MAGEC1O60732 1142 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 SDC3O75056 442 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 PGLSO95336 258 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 FUCA1P04066 466 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 HLA-DQB2P05538 268 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 COMTP21964 271 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 ACP1P24666 158 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 SERPINA4P29622 427 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 MMP13P45452 471 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 SCNN1BP51168 640 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 YPEL5P62699 121 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 IFI35P80217 286 aaPredicted RBP11.32□□□□□ -0.6
CLCC1-201ENST00000302500 RAD51Q06609 339 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 ELP6Q0PNE2 266 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 DNAJC3Q13217 504 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 CNGA3Q16281 694 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 SLC45A4Q5BKX6 768 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 C11orf63Q6NUN7 778 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 MFSD7Q6UXD7 560 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 PARGQ86W56 976 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 ZNF354CQ86Y25 554 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 ATPAF2Q8N5M1 289 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 LRRC57Q8N9N7 239 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 FAM181AQ8N9Y4 354 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 ZNF548Q8NEK5 533 aaPredicted RBP11.32□□□□□ -0.6
CLCC1-201ENST00000302500 SETD7Q8WTS6 366 aaKnown RBP11.32□□□□□ -0.6
CLCC1-201ENST00000302500 SKA1Q96BD8 255 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 TRIB3Q96RU7 358 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 CALN1Q9BXU9 219 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 CLPBQ9H078 707 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 ZNHIT6Q9NWK9 470 aaKnown RBP11.32□□□□□ -0.6
CLCC1-201ENST00000302500 B4GALT6Q9UBX8 382 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 PCDHA13Q9Y5I0 950 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 ALG6Q9Y672 507 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 DUSP10Q9Y6W6 482 aa11.32□□□□□ -0.6
CLCC1-201ENST00000302500 A0A0U1RQS6 177 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.31□□□□□ -0.6
CLCC1-201ENST00000302500 NPIPB15A6NHN6 443 aaPredicted RBP11.31□□□□□ -0.6
CLCC1-201ENST00000302500 K7ESM1 405 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 TAF4O00268 1085 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 TOR1BO14657 336 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 SCAMP1O15126 338 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 SIGLEC6O43699 453 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 GCATO75600 419 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 HEXIM1O94992 359 aaKnown RBP11.31□□□□□ -0.6
CLCC1-201ENST00000302500 NDUFA10O95299 355 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 HOXC4P09017 264 aaPredicted RBP11.31□□□□□ -0.6
CLCC1-201ENST00000302500 CDC25BP30305 580 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 SLC1A1P43005 524 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 ARRB1P49407 418 aaPredicted RBP11.31□□□□□ -0.6
CLCC1-201ENST00000302500 RENBPP51606 427 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 BCL2L1Q07817 233 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 ZNF211Q13398 564 aaPredicted RBP11.31□□□□□ -0.6
CLCC1-201ENST00000302500 KRT81Q14533 505 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 SUZ12Q15022 739 aaKnown RBP11.31□□□□□ -0.6
CLCC1-201ENST00000302500 PRKD1Q15139 912 aaPredicted RBP11.31□□□□□ -0.6
CLCC1-201ENST00000302500 IFI16Q16666 785 aaKnown RBP11.31□□□□□ -0.6
CLCC1-201ENST00000302500 MARC1Q5VT66 337 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 ESRP1Q6NXG1 681 aaKnown RBP11.31□□□□□ -0.6
CLCC1-201ENST00000302500 NPNTQ6UXI9 565 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 UNQ6494/PRO21346Q6UXR6 183 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 MACC1Q6ZN28 852 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 TECPR1Q7Z6L1 1165 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 TSPAN33Q86UF1 283 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 MARCH9Q86YJ5 346 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 RBFAQ8N0V3 343 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 EID2Q8N6I1 236 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 KCTD6Q8NC69 237 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 TPCN2Q8NHX9 752 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 KRT35Q92764 455 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 EID2BQ96D98 161 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 SCRN2Q96FV2 425 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 WDR24Q96S15 920 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 LYSMD1Q96S90 227 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 LGMNQ99538 433 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 LRRC61Q9BV99 259 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 TDRD1Q9BXT4 1180 aaKnown RBP11.31□□□□□ -0.6
CLCC1-201ENST00000302500 DEF6Q9H4E7 631 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 ST14Q9Y5Y6 855 aa11.31□□□□□ -0.6
CLCC1-201ENST00000302500 EPN1Q9Y6I3 576 aaPredicted RBP11.31□□□□□ -0.6
CLCC1-201ENST00000302500 KIF26BQ2KJY2 2108 aa11.3□□□□□ -0.6
CLCC1-201ENST00000302500 ENC1O14682 589 aa11.3□□□□□ -0.6
CLCC1-201ENST00000302500 FPGTO14772 594 aa11.3□□□□□ -0.6
CLCC1-201ENST00000302500 CASC3O15234 703 aaKnown RBP11.3□□□□□ -0.6
CLCC1-201ENST00000302500 PSTPIP1O43586 416 aa11.3□□□□□ -0.6
CLCC1-201ENST00000302500 RECQL5O94762 991 aaPredicted RBP11.3□□□□□ -0.6
CLCC1-201ENST00000302500 PROS1P07225 676 aa11.3□□□□□ -0.6
CLCC1-201ENST00000302500 CELA2BP08218 269 aaPredicted RBP11.3□□□□□ -0.6
CLCC1-201ENST00000302500 PECAM1P16284 738 aaPredicted RBP11.3□□□□□ -0.6
CLCC1-201ENST00000302500 MAGEA1P43355 309 aa11.3□□□□□ -0.6
CLCC1-201ENST00000302500 NOP2P46087 812 aaKnown RBP11.3□□□□□ -0.6
CLCC1-201ENST00000302500 PEX5P50542 639 aa11.3□□□□□ -0.6
CLCC1-201ENST00000302500 SKOR1P84550 965 aa11.3□□□□□ -0.6
CLCC1-201ENST00000302500 DSC2Q02487 901 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms