RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 BHMTQ93088 406 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 MPP4Q96JB8 637 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 OLFM1Q99784 485 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 SMPD4Q9NXE4 827 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 GALNT8Q9NY28 637 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 MARCH4Q9P2E8 410 aaPredicted RBP22.05■■□□□ 1.12
TPM4-201ENST00000300933 ARL5AQ9Y689 179 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 PLXNA3P51805 1871 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 FKTNO75072 461 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 IGLV3-27P01718 113 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 COL6A1P12109 1028 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 HARS2P49590 506 aaKnown RBP22.05■■□□□ 1.12
TPM4-201ENST00000300933 RAB10P61026 200 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 CSHL1Q14406 222 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 MMEL1Q495T6 779 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 SPOUT1Q5T280 376 aaKnown RBP22.05■■□□□ 1.12
TPM4-201ENST00000300933 IL31Q6EBC2 164 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 C16orf59Q7L2K0 433 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 PHTF2Q8N3S3 785 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 CCNYL1Q8N7R7 359 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 CYP2S1Q96SQ9 504 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 GPAMQ9HCL2 828 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 OLA1Q9NTK5 396 aaKnown RBP22.05■■□□□ 1.12
TPM4-201ENST00000300933 OXSMQ9NWU1 459 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 CRYL1Q9Y2S2 319 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 A0A0U1RQS6 177 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 SIN3BO75182 1162 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 KLKB1P03952 638 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 SERPINA6P08185 405 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 SLC12A1Q13621 1099 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 GDPD5Q8WTR4 605 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 NSMCE3Q96MG7 304 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 DRGXA6NNA5 263 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 F5H5T6 163 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 HNRNPRO43390 633 aaKnown RBP22.04■■□□□ 1.12
TPM4-201ENST00000300933 FKBP6O75344 327 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 PABPC4LP0CB38 370 aaKnown RBP22.04■■□□□ 1.12
TPM4-201ENST00000300933 PRSS56P0CW18 603 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 VCLP18206 1134 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 ATP5C1P36542 298 aaKnown RBP22.04■■□□□ 1.12
TPM4-201ENST00000300933 CD151P48509 253 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 PLK1P53350 603 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 ARL13AQ5H913 290 aaPredicted RBP22.04■■□□□ 1.12
TPM4-201ENST00000300933 TSTD2Q5T7W7 516 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 TDRD5Q8NAT2 981 aaKnown RBP22.04■■□□□ 1.12
TPM4-201ENST00000300933 SPATA17Q96L03 361 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 RNF38Q9H0F5 515 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 RNF208Q9H0X6 261 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 CYP4F12Q9HCS2 524 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 PCDHB12Q9Y5F1 795 aa22.04■■□□□ 1.12
TPM4-201ENST00000300933 CSPG5O95196 566 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 UQCRBP14927 111 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 DNAJB2P25686 324 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 CPOXP36551 454 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 PTPRRQ15256 657 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 LRRC49Q8IUZ0 686 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 CNTN4Q8IWV2 1026 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 C2CD4AQ8NCU7 369 aaPredicted RBP22.03■■□□□ 1.12
TPM4-201ENST00000300933 HEXDCQ8WVB3 486 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 TBATAQ96M53 351 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 TSNARE1Q96NA8 513 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 OR52B2Q96RD2 323 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 KLHL4Q9C0H6 718 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 TBC1D30Q9Y2I9 924 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 COCHO43405 550 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 DCXO43602 365 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 DLX3O60479 287 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 JUNP05412 331 aaKnown RBP22.03■■□□□ 1.12
TPM4-201ENST00000300933 PAMP19021 973 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 RGRP47804 291 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 ZNF235Q14590 738 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 TRIP10Q15642 601 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 RABGAP1LQ5R372 815 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 LRRC8EQ6NSJ5 796 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 GPR78Q96P69 363 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 CCDC28BQ9BUN5 200 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 FIS1Q9Y3D6 152 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 HEATR9A2RTY3 570 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 C2orf78A6NCI8 922 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 TMEM233B4DJY2 109 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 H7C4K7 107 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 CSRP3P50461 194 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 SLC12A2P55011 1212 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 CLSTN3Q9BQT9 956 aa22.03■■□□□ 1.12
TPM4-201ENST00000300933 CCDC160A6NGH7 325 aa22.02■■□□□ 1.12
TPM4-201ENST00000300933 PIGNO95427 931 aa22.02■■□□□ 1.12
TPM4-201ENST00000300933 ATXN1LP0C7T5 689 aaKnown RBP22.02■■□□□ 1.12
TPM4-201ENST00000300933 ZDHHC11BP0C7U3 371 aa22.02■■□□□ 1.12
TPM4-201ENST00000300933 PDK3Q15120 406 aa22.02■■□□□ 1.12
TPM4-201ENST00000300933 UGP2Q16851 508 aa22.02■■□□□ 1.12
TPM4-201ENST00000300933 KIAA0930Q6ICG6 404 aaPredicted RBP22.02■■□□□ 1.12
TPM4-201ENST00000300933 PIM3Q86V86 326 aa22.02■■□□□ 1.12
TPM4-201ENST00000300933 OR13C4Q8NGS5 318 aa22.02■■□□□ 1.12
TPM4-201ENST00000300933 FAM210AQ96ND0 272 aa22.02■■□□□ 1.12
TPM4-201ENST00000300933 ATP13A1Q9HD20 1204 aa22.02■■□□□ 1.12
TPM4-201ENST00000300933 ZDHHC2Q9UIJ5 367 aa22.02■■□□□ 1.12
TPM4-201ENST00000300933 DNMT3LQ9UJW3 386 aa22.02■■□□□ 1.12
TPM4-201ENST00000300933 FNDC3AQ9Y2H6 1198 aaKnown RBP22.02■■□□□ 1.12
TPM4-201ENST00000300933 PITPNM1O00562 1244 aa22.02■■□□□ 1.11
TPM4-201ENST00000300933 EPHA3P29320 983 aa22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms