RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 CNTN4Q8IWV2 1026 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 KLHDC8BQ8IXV7 354 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 STYXQ8WUJ0 223 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 CATSPER2Q96P56 530 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 GPR78Q96P69 363 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 SCUBE2Q9NQ36 999 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 VWA7Q9Y334 891 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 H3BNC9 293 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 CKMP06732 381 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 CTPS1P17812 591 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 HDCP19113 662 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 MNX1P50219 401 aaPredicted RBP14.63□□□□□ -0.07
SMG8-201ENST00000300917 RIPK1Q13546 671 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 CCDC6Q16204 474 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 PPM1LQ5SGD2 360 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 SH2D4BQ5SQS7 431 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 HS6ST3Q8IZP7 471 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.63□□□□□ -0.07
SMG8-201ENST00000300917 NRG2O14511 850 aaPredicted RBP14.63□□□□□ -0.07
SMG8-201ENST00000300917 TEX28O15482 410 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 GLP2RO95838 553 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 TFEBP19484 476 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 FMO4P31512 558 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 CDH4P55283 916 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 CDH13P55290 713 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 KRT72Q14CN4 511 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 ACSBG2Q5FVE4 666 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 ADGRF1Q5T601 910 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 TRIM67Q6ZTA4 783 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 MRPL46Q9H2W6 279 aaKnown RBP14.63□□□□□ -0.07
SMG8-201ENST00000300917 PDFQ9HBH1 243 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 ARNT2Q9HBZ2 717 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 SARS2Q9NP81 518 aaKnown RBP14.63□□□□□ -0.07
SMG8-201ENST00000300917 TLR9Q9NR96 1032 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 SEPT3Q9UH03 358 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 CPQQ9Y646 472 aa14.63□□□□□ -0.07
SMG8-201ENST00000300917 LOC285095A0A1B0GVY8 99 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 LRRC14BA6NHZ5 514 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 CD3EAPO15446 510 aaKnown RBP14.62□□□□□ -0.07
SMG8-201ENST00000300917 S1PR4O95977 384 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 KPNA1P52294 538 aaPredicted RBP14.62□□□□□ -0.07
SMG8-201ENST00000300917 SMARCB1Q12824 385 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 CUL3Q13618 768 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 GLT6D1Q7Z4J2 308 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 BBS5Q8N3I7 341 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 CFAP61Q8NHU2 1237 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 TNFRSF12AQ9NP84 129 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 TCF7L2Q9NQB0 619 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 IGSF5Q9NSI5 407 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.62□□□□□ -0.07
SMG8-201ENST00000300917 PLA2G4CQ9UP65 541 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 CCND1P24385 295 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 GABRR2P28476 465 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 FRG1Q14331 258 aaKnown RBP14.62□□□□□ -0.07
SMG8-201ENST00000300917 C2orf15Q8WU43 125 aaKnown RBP14.62□□□□□ -0.07
SMG8-201ENST00000300917 PTCD2Q8WV60 388 aaKnown RBP14.62□□□□□ -0.07
SMG8-201ENST00000300917 TOP1MTQ969P6 601 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 MAGEH1Q9H213 219 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 ANKRD6Q9Y2G4 727 aa14.62□□□□□ -0.07
SMG8-201ENST00000300917 NCF1BA6NI72 391 aaPredicted RBP14.61□□□□□ -0.07
SMG8-201ENST00000300917 NCF1CA8MVU1 366 aaPredicted RBP14.61□□□□□ -0.07
SMG8-201ENST00000300917 TRAFD1O14545 582 aaPredicted RBP14.61□□□□□ -0.07
SMG8-201ENST00000300917 NCF1P14598 390 aaPredicted RBP14.61□□□□□ -0.07
SMG8-201ENST00000300917 CRABP2P29373 138 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 ATXN3P54252 364 aaPredicted RBP14.61□□□□□ -0.07
SMG8-201ENST00000300917 RCN1Q15293 331 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 FAM83EQ2M2I3 478 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 SEL1L3Q68CR1 1132 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 CNKSR3Q6P9H4 555 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 ANKRD33Q7Z3H0 272 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 LSMEM2Q8N112 164 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 SLC39A11Q8N1S5 342 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 MDGA1Q8NFP4 955 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 CALML6Q8TD86 181 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 RAI2Q9Y5P3 530 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 DOCK6Q96HP0 2047 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 ATP6AP2A0A1C7CYW4 349 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 MROH6A6NGR9 719 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 AIM2O14862 343 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 INSIG1O15503 277 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 CLDN11O75508 207 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 ATP6AP2O75787 350 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 MSX2P35548 267 aaPredicted RBP14.61□□□□□ -0.07
SMG8-201ENST00000300917 RPL14P50914 215 aaKnown RBP14.61□□□□□ -0.07
SMG8-201ENST00000300917 ARF5P84085 180 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 POU4F1Q01851 419 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 CDH18Q13634 790 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 CYTH1Q15438 398 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 LRRC26Q2I0M4 334 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 LSM12Q3MHD2 195 aaKnown RBP14.61□□□□□ -0.07
SMG8-201ENST00000300917 ZNF549Q6P9A3 640 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 TMEM150AQ86TG1 271 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 DDI1Q8WTU0 396 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 RPL10LQ96L21 214 aaKnown RBP14.61□□□□□ -0.07
SMG8-201ENST00000300917 PPP1R2P1Q96PQ5 205 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 NCKIPSDQ9NZQ3 722 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 CLEC4EQ9ULY5 219 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 PCDHB9Q9Y5E1 797 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 BACE2Q9Y5Z0 518 aa14.61□□□□□ -0.07
SMG8-201ENST00000300917 MIA3Q5JRA6 1907 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms