RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 WNT3AP56704 352 aa12.64□□□□□ -0.39
TMEM200A-201ENST00000296978 SULT2A1Q06520 285 aa12.64□□□□□ -0.39
TMEM200A-201ENST00000296978 PAFAH1B3Q15102 231 aaKnown RBP12.64□□□□□ -0.39
TMEM200A-201ENST00000296978 PKDCCQ504Y2 493 aa12.64□□□□□ -0.39
TMEM200A-201ENST00000296978 ERI1Q8IV48 349 aaKnown RBP12.64□□□□□ -0.39
TMEM200A-201ENST00000296978 RIN3Q8TB24 985 aa12.64□□□□□ -0.39
TMEM200A-201ENST00000296978 GAB3Q8WWW8 586 aa12.64□□□□□ -0.39
TMEM200A-201ENST00000296978 ESAMQ96AP7 390 aa12.64□□□□□ -0.39
TMEM200A-201ENST00000296978 VPS33AQ96AX1 596 aa12.64□□□□□ -0.39
TMEM200A-201ENST00000296978 C12orf43Q96C57 262 aaKnown RBP12.64□□□□□ -0.39
TMEM200A-201ENST00000296978 FBXL8Q96CD0 374 aa12.64□□□□□ -0.39
TMEM200A-201ENST00000296978 HBEGFQ99075 208 aa12.64□□□□□ -0.39
TMEM200A-201ENST00000296978 GLOD4Q9HC38 313 aa12.64□□□□□ -0.39
TMEM200A-201ENST00000296978 PTGES3LE9PB15 166 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 PENKP01210 267 aaPredicted RBP12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 BNIP3Q12983 259 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 ZNF789Q5FWF6 425 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 PRAMEF19Q5SWL8 479 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 TMEM26Q6ZUK4 368 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 PIM3Q86V86 326 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 METTL23Q86XA0 190 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 BPIFB6Q8NFQ5 453 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 SPPL2BQ8TCT7 592 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 CENPIQ92674 756 aaPredicted RBP12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 C19orf60Q96EN9 201 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 PRSS51A0A1B0GVH4 220 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 DCLK1O15075 740 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 SOX4Q06945 474 aaPredicted RBP12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 DNAJC14Q6Y2X3 702 aaPredicted RBP12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 CRYBG2Q8N1P7 616 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 LPPQ93052 612 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 RMDN1Q96DB5 314 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 C9orf16Q9BUW7 83 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 YIPF2Q9BWQ6 316 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 RBPJLQ9UBG7 517 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 VWA7Q9Y334 891 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 RNF11Q9Y3C5 154 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 PCDHGA7Q9Y5G6 932 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 QSER1Q2KHR3 1735 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 A0A087X1B8 175 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 GABRB3P28472 473 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 ADSLP30566 484 aaPredicted RBP12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 DAOAP59103 153 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 ARHGAP1Q07960 439 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 LSMEM2Q8N112 164 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 TNIP2Q8NFZ5 429 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 SPON2Q9BUD6 331 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 OSBPL6Q9BZF3 934 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 CATSPERBQ9H7T0 1116 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 PLK2Q9NYY3 685 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 SELENONQ9NZV5 590 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 FBXW11Q9UKB1 542 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 CEPT1Q9Y6K0 416 aa12.63□□□□□ -0.39
TMEM200A-201ENST00000296978 RHOBTB1O94844 696 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 LDLRP01130 860 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 ATP6V1B2P21281 511 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 CDK9P50750 372 aaKnown RBP12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 TIGD2Q4W5G0 525 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 MIB1Q86YT6 1006 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 SLC22A9Q8IVM8 553 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 PCED1BQ96HM7 432 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 KCNA7Q96RP8 456 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 ZNF112Q9UJU3 913 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 RNF112Q9ULX5 631 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 SHROOM3Q8TF72 1996 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 NRXN2Q9P2S2 1712 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 LRRC14BA6NHZ5 514 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 H3BNH8 94 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 SNX2O60749 519 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 RPL26P61254 145 aaKnown RBP12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 ECT2LQ008S8 904 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 POU4F1Q01851 419 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 PPP1R8Q12972 351 aaKnown RBP12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 FAM187BQ17R55 369 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 HECTD2Q5U5R9 776 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 GPRIN1Q7Z2K8 1008 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 TAC4Q86UU9 113 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 RALGPS2Q86X27 583 aaPredicted RBP12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 HNRNPABQ99729 332 aaKnown RBP12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 ZFYVE28Q9HCC9 887 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 SUCOQ9UBS9 1254 aaKnown RBP12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 CPA4Q9UI42 421 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 TCAF1Q9Y4C2 921 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 GOLGA8CPA6NN73 597 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 SYCE1LA8MT33 242 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 PIP5K1BO14986 540 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 ZBTB11O95625 1053 aaPredicted RBP12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 BCL10O95999 233 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 COL6A2P12110 1019 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 ZNF26P17031 533 aaPredicted RBP12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 OCA2Q04671 838 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 HERC3Q15034 1050 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 PERM1Q5SV97 790 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 TMEM214Q6NUQ4 689 aaKnown RBP12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 FIBCD1Q8N539 461 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 TMCO5AQ8N6Q1 288 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 TMEM102Q8N9M5 508 aaPredicted RBP12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 FAM110BQ8TC76 370 aa12.62□□□□□ -0.39
TMEM200A-201ENST00000296978 LZICQ8WZA0 190 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms