RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 TPSD1Q9BZJ3 242 aa2.8□□□□□ -1.96
CHD1-201ENST00000284049 PALMDQ9NP74 551 aa2.8□□□□□ -1.96
CHD1-201ENST00000284049 TMEM82A0PJX8 343 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 PLK4O00444 970 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 GNB5O14775 395 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 IFIT3O14879 490 aaKnown RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 MFAP3LO75121 409 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 SLC43A1O75387 559 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 SERPINI2O75830 405 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 MPIG6BO95866 241 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 PCCBP05166 539 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 EPB41P11171 864 aaKnown RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 ETV4P43268 484 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 MXI1P50539 228 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 KCNK10P57789 538 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 CEBPZQ03701 1054 aaKnown RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 SP140Q13342 867 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 TBCCQ15814 346 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 MYLK3Q32MK0 819 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 USH1GQ495M9 461 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 FASTKD1Q53R41 847 aaKnown RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 HS1BP3Q53T59 392 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 ZNF766Q5HY98 468 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 RALGPS1Q5JS13 557 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 TBC1D26Q86UD7 250 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 DENND6AQ8IWF6 608 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 DHX40Q8IX18 779 aaKnown RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 TIGD4Q8IY51 512 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 SUPT20HQ8NEM7 779 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 LILRB1Q8NHL6 650 aaPredicted RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 FNDC11Q9BVV2 318 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 POLR1BQ9H9Y6 1135 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 XPNPEP3Q9NQH7 507 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 GTSE1Q9NYZ3 720 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 FBXW11Q9UKB1 542 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 A0A0B4J293 547 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 CCDC195A0A1B0GUA6 201 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 AP4M1O00189 453 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 DNM1LO00429 736 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 ADAM20O43506 726 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 HLA-DQA2P01906 255 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 ICAM3P32942 547 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 KRT2P35908 639 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 CHRNA4P43681 627 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 FASLGP48023 281 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 TAP1Q03518 808 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 DMTNQ08495 405 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 MZT1Q08AG7 82 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 IRF3Q14653 427 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 DRAP1Q14919 205 aaPredicted RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 ZKSCAN8Q15776 578 aaPredicted RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 MPP7Q5T2T1 576 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 RBM20Q5T481 1227 aaKnown RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 CXXC5Q7LFL8 322 aaKnown RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 RFX6Q8HWS3 928 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 CROCCP3Q8IVE0 287 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 PSD4Q8NDX1 1056 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 TMIEQ8NEW7 156 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 IL17RDQ8NFM7 739 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 SLC13A3Q8WWT9 602 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 SELENOMQ8WWX9 145 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 ZNF606Q8WXB4 792 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 RNF31Q96EP0 1072 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 MLPHQ9BV36 600 aaPredicted RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 ZNF416Q9BWM5 594 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 TASP1Q9H6P5 420 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 INTS13Q9NVM9 706 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 UTP6Q9NYH9 597 aaKnown RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 MARCH4Q9P2E8 410 aaPredicted RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 MGAT4CQ9UBM8 478 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 ZNF148Q9UQR1 794 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 NOX1Q9Y5S8 564 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 PEAK1Q9H792 1746 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 OR6C68A6NDL8 312 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 PPM1DO15297 605 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 OPN1MWP04001 364 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 ALPPP05187 535 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 URODP06132 367 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 OPN1MW2P0DN77 364 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 OPN1MW3P0DN78 364 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 ALPPL2P10696 532 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 HLA-FP30511 346 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 MAPK4P31152 587 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 GPC3P51654 580 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 PTCHD3Q3KNS1 767 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 TAF1BQ53T94 588 aaPredicted RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 UBQLNLQ8IYU4 475 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 NEK9Q8TD19 979 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 IRF7Q92985 503 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 TSGA13Q96PP4 275 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 CCT7Q99832 543 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 ADGRE3Q9BY15 652 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 PUS3Q9BZE2 481 aaKnown RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 FN3KQ9H479 309 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 ERAP1Q9NZ08 941 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 AIPL1Q9NZN9 384 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 DNMT3BQ9UBC3 853 aaKnown RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 SLC25A10Q9UBX3 287 aaPredicted RBP2.79□□□□□ -1.96
CHD1-201ENST00000284049 TLK1Q9UKI8 766 aa2.79□□□□□ -1.96
CHD1-201ENST00000284049 CCL27Q9Y4X3 112 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms