RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 DUSP19Q8WTR2 217 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 WASF1Q92558 559 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 HOXB13Q92826 284 aaPredicted RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 RAB7BQ96AH8 199 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 NACC2Q96BF6 587 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CNOT6LQ96LI5 555 aaKnown RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 CMTM3Q96MX0 182 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 FIZ1Q96SL8 496 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 PACSIN1Q9BY11 444 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 TRIM7Q9C029 511 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 HAPLN2Q9GZV7 340 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 KAT14Q9H8E8 782 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 IL23AQ9NPF7 189 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 SEMA4BQ9NPR2 832 aaPredicted RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 HOMER3Q9NSC5 361 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 ABCB8Q9NUT2 735 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 EXOC1Q9NV70 894 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 AURKAIP1Q9NWT8 199 aaPredicted RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 CYP39A1Q9NYL5 469 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 EHD2Q9NZN4 543 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 SARDHQ9UL12 918 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CHTOPQ9Y3Y2 248 aaKnown RBP4.7□□□□□ -1.66
CD44-202ENST00000278385 ASB3Q9Y575 518 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 CLCA3PQ9Y6N3 262 aa4.7□□□□□ -1.66
CD44-202ENST00000278385 COL11A2P13942 1736 aaPredicted RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 FER1L6Q2WGJ9 1857 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 ARHGEF37A1IGU5 675 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 UBE2QL1A1L167 161 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 SYCE3A1L190 88 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 EFCAB8A8MWE9 144 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 CAPN14A8MX76 684 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 H0YCG3 227 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 GRM8O00222 908 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 FOXS1O43638 330 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 PPP6R2O75170 966 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 LETM1O95202 739 aaPredicted RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 ALPPP05187 535 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 LTA4HP09960 611 aaKnown RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 ALPPL2P10696 532 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 PRG2P13727 222 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 ACO1P21399 889 aaKnown RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 SP100P23497 879 aaPredicted RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 HIBADHP31937 336 aaKnown RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 SLC6A9P48067 706 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 KCNJ5P48544 419 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 NRIP1P48552 1158 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 CDK7P50613 346 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 CDH8P55286 799 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 WNT3AP56704 352 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 TRA2BP62995 288 aaKnown RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 ADAM17P78536 824 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 TDGQ13569 410 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 INSCQ1MX18 579 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 CCDC57Q2TAC2 916 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 GALNTL6Q49A17 601 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 ANKRD20A4Q4UJ75 823 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 ANKRD20A8PQ5CZ79 823 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 ZNF484Q5JVG2 852 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 ANKRD20A2Q5SQ80 823 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 UTP14CQ5TAP6 766 aaKnown RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 ANKRD20A1Q5TYW2 823 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 ANKRD20A3Q5VUR7 823 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 MRNIPQ6NTE8 343 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 RINT1Q6NUQ1 792 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 TTI2Q6NXR4 508 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 CRELD2Q6UXH1 353 aaPredicted RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 RSPH3Q86UC2 560 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 FAM83AQ86UY5 434 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 RASGRP3Q8IV61 690 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 BCL6BQ8N143 479 aaPredicted RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 Q8TCH9 128 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 AGR3Q8TD06 166 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 CCHCR1Q8TD31 782 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 SLC13A3Q8WWT9 602 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 MRPS27Q92552 414 aaKnown RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 PRCCQ92733 491 aaPredicted RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 CORO2AQ92828 525 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 ALG14Q96F25 216 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 TMX3Q96JJ7 454 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 TCEANC2Q96MN5 208 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 RUFY1Q96T51 708 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 PIP5K1AQ99755 562 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 HTATIP2Q9BUP3 242 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 NACAP1Q9BZK3 213 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 FAM129AQ9BZQ8 928 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 SLC5A7Q9GZV3 580 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 COA1Q9GZY4 146 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 STMN4Q9H169 189 aaPredicted RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 WNT5BQ9H1J7 359 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 MANSC1Q9H8J5 431 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 MMRN2Q9H8L6 949 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 SCPEP1Q9HB40 452 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 ZNF70Q9UC06 446 aaPredicted RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 ANAPC2Q9UJX6 822 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 ABT1Q9ULW3 272 aaKnown RBP4.69□□□□□ -1.66
CD44-202ENST00000278385 CHKBQ9Y259 395 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 PTPRCP08575 1304 aa4.69□□□□□ -1.66
CD44-202ENST00000278385 CNTNAP1P78357 1384 aa4.68□□□□□ -1.66
CD44-202ENST00000278385 TNRC6CQ9HCJ0 1690 aaKnown RBP4.68□□□□□ -1.66
CD44-202ENST00000278385 NUP98P52948 1817 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms