RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ITIH4Q14624 930 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 TAF1BQ53T94 588 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 ZNF789Q5FWF6 425 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 CNSTQ6PJW8 725 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 C6orf89Q6UWU4 347 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 OTOAQ7RTW8 1153 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 CLEC14AQ86T13 490 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 CAMK1DQ8IU85 385 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 NUDCD3Q8IVD9 361 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 LMNTD2Q8IXW0 634 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 PLD6Q8N2A8 252 aaKnown RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 EFHBQ8N7U6 833 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 MYO19Q96H55 970 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 NLE1Q9NVX2 485 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 ZNF358Q9NW07 568 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 TMEM216Q9P0N5 145 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 MARCH4Q9P2E8 410 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 STARD13Q9Y3M8 1113 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 PCDHB9Q9Y5E1 797 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 CXorf51AA0A1B0GTR3 108 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 C2orf81A6NN90 581 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 SLC9A3R1O14745 358 aaPredicted RBP11.6□□□□□ -0.55
SCAF11-201ENST00000266589 BIRC5O15392 142 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 ZNF821O75541 412 aaPredicted RBP11.6□□□□□ -0.55
SCAF11-201ENST00000266589 PIGNO95427 931 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 GLP2RO95838 553 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 PROCP04070 461 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 GKP32189 559 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 ABL2P42684 1182 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 POLD2P49005 469 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 EPHB1P54762 984 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 IFT88Q13099 833 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 KCNC3Q14003 757 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 RAB30Q15771 203 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 DGKKQ5KSL6 1271 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 ARMC12Q5T9G4 340 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 GALNT7Q86SF2 657 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 LDB1Q86U70 411 aaPredicted RBP11.6□□□□□ -0.55
SCAF11-201ENST00000266589 TRIM42Q8IWZ5 723 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 ADGRG2Q8IZP9 1017 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 RYBPQ8N488 228 aaPredicted RBP11.6□□□□□ -0.55
SCAF11-201ENST00000266589 CELF5Q8N6W0 485 aaKnown RBP11.6□□□□□ -0.55
SCAF11-201ENST00000266589 PNPLA1Q8N8W4 532 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 ZNF557Q8N988 423 aaPredicted RBP11.6□□□□□ -0.55
SCAF11-201ENST00000266589 OR4K2Q8NGD2 314 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 THOC1Q96FV9 657 aaKnown RBP11.6□□□□□ -0.55
SCAF11-201ENST00000266589 LRRC3BQ96PB8 259 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 TSSK1BQ9BXA7 367 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 SLC28A3Q9HAS3 691 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 SIRPGQ9P1W8 387 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 SLC25A13Q9UJS0 675 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 TLK1Q9UKI8 766 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 HS3ST2Q9Y278 367 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 ANKRD6Q9Y2G4 727 aa11.6□□□□□ -0.55
SCAF11-201ENST00000266589 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.59□□□□□ -0.55
SCAF11-201ENST00000266589 KLF11O14901 512 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 CD3EAPO15446 510 aaKnown RBP11.59□□□□□ -0.55
SCAF11-201ENST00000266589 PGLSO95336 258 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 GSRP00390 522 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 SLC35E2BP0CK96 405 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 STMN1P16949 149 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 LPOP22079 712 aaPredicted RBP11.59□□□□□ -0.55
SCAF11-201ENST00000266589 MAPK8P45983 427 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 GRIA4P48058 902 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 CSNK1DP48730 415 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 CLCN5P51795 746 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 RAB10P61026 200 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 BCL2L1Q07817 233 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 ZNF460Q14592 562 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 PTPRRQ15256 657 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 CHI3L2Q15782 390 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 CCDC153Q494R4 210 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 FASTKD1Q53R41 847 aaKnown RBP11.59□□□□□ -0.55
SCAF11-201ENST00000266589 RARS2Q5T160 578 aaKnown RBP11.59□□□□□ -0.55
SCAF11-201ENST00000266589 RBM20Q5T481 1227 aaKnown RBP11.59□□□□□ -0.55
SCAF11-201ENST00000266589 C22orf39Q6P5X5 142 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 CEP97Q8IW35 865 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 NAT16Q8N8M0 369 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 OR2AP1Q8NGE2 309 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 OR4L1Q8NH43 312 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 E2F7Q96AV8 911 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 CDKN2AIPNLQ96HQ2 116 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 NDNQ99608 321 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 IGFLR1Q9H665 355 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 CATSPERZQ9NTU4 200 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 POLR3BQ9NW08 1133 aaPredicted RBP11.59□□□□□ -0.55
SCAF11-201ENST00000266589 MARK1Q9P0L2 795 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 PAPLNO95428 1278 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 S1PR4O95977 384 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 CTPS1P17812 591 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 SLC12A2P55011 1212 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 SNRPD1P62314 119 aaKnown RBP11.59□□□□□ -0.55
SCAF11-201ENST00000266589 POU4F1Q01851 419 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 MRNIPQ6NTE8 343 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 NPAS3Q8IXF0 933 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 PAF1Q8N7H5 531 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 GPR150Q8NGU9 434 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 RSPRY1Q96DX4 576 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 TSNARE1Q96NA8 513 aa11.59□□□□□ -0.55
SCAF11-201ENST00000266589 CDCA3Q99618 268 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms