RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 ARHGEF4Q9NR80 690 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 C2orf81A6NN90 581 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 SEC22BO75396 215 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 EGFRP00533 1210 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 ANXA6P08133 673 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 SERPINH1P50454 418 aaKnown RBP16.27■□□□□ 0.19
SREBF1-201ENST00000261646 FBXO48Q5FWF7 155 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 ZNF484Q5JVG2 852 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 ABHD15Q6UXT9 468 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 DENND6AQ8IWF6 608 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 CCDC185Q8N715 623 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 LEMD2Q8NC56 503 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 PHC3Q8NDX5 983 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 REPS2Q8NFH8 660 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 OR6J1Q8NGC5 347 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 OXSMQ9NWU1 459 aa16.27■□□□□ 0.19
SREBF1-201ENST00000261646 IFT80Q9P2H3 777 aaPredicted RBP16.27■□□□□ 0.19
SREBF1-201ENST00000261646 LRP6O75581 1613 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 TAF1P21675 1872 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 EFCAB10A6NFE3 127 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 B4GALT4O60513 344 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 TNFRSF21O75509 655 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 RECQL5O94762 991 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-201ENST00000261646 B3GAT3O94766 335 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 FGFR1P11362 822 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 COL6A2P12110 1019 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 NMBRP28336 390 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 GCAP28676 217 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 FMO4P31512 558 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 CCR10P46092 362 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 TAS2R39P59534 338 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 CEACAM7Q14002 265 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 PDPRQ8NCN5 879 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 STAG3L4Q8TBR4 150 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 TMIGD2Q96BF3 282 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 TPD52L3Q96J77 140 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 VPS9D1Q9Y2B5 631 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 MYH11P35749 1972 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 BBIP1A8MTZ0 92 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 FBP2O00757 339 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 ZNF197O14709 1029 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 HTRA2O43464 458 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-201ENST00000261646 FTH1P02794 183 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 TGFB3P10600 412 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 CDK4P11802 303 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 IDO1P14902 403 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 MRPS5P82675 430 aaKnown RBP16.26■□□□□ 0.19
SREBF1-201ENST00000261646 TRIM32Q13049 653 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 OGFRL1Q5TC84 451 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-201ENST00000261646 PHF21AQ96BD5 680 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 NODALQ96S42 347 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 TRMOQ9BU70 441 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 ALG2Q9H553 416 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 ACTR8Q9H981 624 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 PDGFCQ9NRA1 345 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 TUBGCP4Q9UGJ1 667 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 TIMM22Q9Y584 194 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 AKAP11Q9UKA4 1901 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 DENRO43583 198 aaKnown RBP16.26■□□□□ 0.19
SREBF1-201ENST00000261646 AP2A1O95782 977 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 GPIP06744 558 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 PRIM2P49643 509 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 TUBA4AP68366 448 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 CYP4F2P78329 520 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 ECT2LQ008S8 904 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 CYP4F3Q08477 520 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 MAPKAPK3Q16644 382 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 TEX44Q53QW1 395 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 CEP78Q5JTW2 689 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 PDZK1Q5T2W1 519 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 OTOP3Q7RTS5 596 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 CPSF7Q8N684 471 aaKnown RBP16.26■□□□□ 0.19
SREBF1-201ENST00000261646 OR9I1Q8NGQ6 314 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 C17orf50Q8WW18 174 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 TRMT13Q9NUP7 481 aaKnown RBP16.26■□□□□ 0.19
SREBF1-201ENST00000261646 KLHL3Q9UH77 587 aa16.26■□□□□ 0.19
SREBF1-201ENST00000261646 ATRNL1Q5VV63 1379 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 MTHFD1P11586 935 aaKnown RBP16.25■□□□□ 0.19
SREBF1-201ENST00000261646 MTHFRP42898 656 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 BCAP31P51572 246 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 HSDL1Q3SXM5 330 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 SPOUT1Q5T280 376 aaKnown RBP16.25■□□□□ 0.19
SREBF1-201ENST00000261646 PLD6Q8N2A8 252 aaKnown RBP16.25■□□□□ 0.19
SREBF1-201ENST00000261646 DNERQ8NFT8 737 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 MCRS1Q96EZ8 462 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 TEKT5Q96M29 485 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 MRPL45Q9BRJ2 306 aaKnown RBP16.25■□□□□ 0.19
SREBF1-201ENST00000261646 DKK3Q9UBP4 350 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.25■□□□□ 0.191e-7■■■□□ 14.8
SREBF1-201ENST00000261646 DUSP12Q9UNI6 340 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 MYO5AQ9Y4I1 1855 aaKnown RBP16.25■□□□□ 0.19
SREBF1-201ENST00000261646 PRKCQQ04759 706 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 PKN3Q6P5Z2 889 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 NECAB2Q7Z6G3 386 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 ZNF696Q9H7X3 374 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 FAM189A1O60320 539 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 SLC22A3O75751 556 aa16.25■□□□□ 0.19
SREBF1-201ENST00000261646 FADS2O95864 444 aaKnown RBP16.25■□□□□ 0.19
SREBF1-201ENST00000261646 EIF2S1P05198 315 aaKnown RBP16.25■□□□□ 0.19
SREBF1-201ENST00000261646 ITGB6P18564 788 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms