RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 NRG4Q8WWG1 115 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 PGM2Q96G03 612 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 BMFQ96LC9 184 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 SCLT1Q96NL6 688 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 SMPD4Q9NXE4 827 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 OGFRQ9NZT2 677 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 KMT2AQ03164 3969 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 ATXN2Q99700 1313 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 TRBV5-3A0A0A0MS03 114 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 CEP104O60308 925 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 C8AP07357 584 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 PHKG1Q16816 387 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 SV2CQ496J9 727 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 ADGRF1Q5T601 910 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 VWA5B1Q5TIE3 1220 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 TMC5Q6UXY8 1006 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 MBOAT1Q6ZNC8 495 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 RGS9BPQ6ZS82 235 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 Q6ZSR9 355 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 CD200R1Q8TD46 325 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 FGF11Q92914 225 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 FCRL5Q96RD9 977 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 TRIM8Q9BZR9 551 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 CHST8Q9H2A9 424 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 DAAM1Q9Y4D1 1078 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 SGK1O00141 431 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 OR7A17O14581 309 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 ASGR2P07307 311 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 FAM200BP0CF97 657 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 BPIP17213 487 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 TACR2P21452 398 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 CSKP41240 450 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 LHX1P48742 406 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 LY6G5CQ5SRR4 150 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 CRTC1Q6UUV9 634 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 PSTKQ8IV42 348 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 CLDN19Q8N6F1 224 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 PTCD3Q96EY7 689 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 MLXIPLQ9NP71 852 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 EXOC7Q9UPT5 735 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 SLC27A6Q9Y2P4 619 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 PAPSS2O95340 614 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 CCR7P32248 378 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 GJC1P36383 396 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 CDH6P55285 790 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 NKG7Q16617 165 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 C16orf46Q6P387 395 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 TNS4Q8IZW8 715 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 CPXM2Q8N436 756 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 MCUQ8NE86 351 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 SPDYE1Q8NFV5 336 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 CYB5D2Q8WUJ1 264 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 APOBEC4Q8WW27 367 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 SLCO4A1Q96BD0 722 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 ANKRD36BP1Q96IX9 119 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 ASPSCR1Q9BZE9 553 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 MYO7BQ6PIF6 2116 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 APC2O95996 2303 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 CCDC195A0A1B0GUA6 201 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 E2F3O00716 465 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 HOXC11O43248 304 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 ADRA1DP25100 572 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 SH3BP2P78314 561 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 RAE1P78406 368 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 CTBP1Q13363 440 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 ANKRD34AQ69YU3 496 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 NEK5Q6P3R8 708 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 DTX1Q86Y01 620 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 TMEM145Q8NBT3 493 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 FIBINQ8TAL6 211 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 USP33Q8TEY7 942 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 APBB2Q92870 758 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 SKA1Q96BD8 255 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 PRKD2Q9BZL6 878 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 UNKQ9C0B0 810 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 TMEM184CQ9NVA4 438 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 KIAA1257Q9ULG3 409 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 PLAAQ9Y263 795 aa5.66□□□□□ -1.5
TOPBP1-201ENST00000260810 POLQO75417 2590 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 PTPRQQ9UMZ3 2332 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 RASA4BC9J798 803 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 RASA4O43374 803 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 PROCP04070 461 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 LAMP2P13473 410 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 SLC19A1P41440 591 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 CTSCP53634 463 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 FPGSQ05932 587 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 KIF5AQ12840 1032 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 CNGA3Q16281 694 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 LRRC66Q68CR7 880 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 LAYNQ6UX15 382 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 PEX26Q7Z412 305 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 MMP21Q8N119 569 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 FBXO36Q8NEA4 188 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 HTR3CQ8WXA8 447 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 VPS33AQ96AX1 596 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 BICD1Q96G01 975 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 CEP295NLQ96MC4 621 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms