RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 SIX3O95343 332 aaPredicted RBP20.18■□□□□ 0.82
CACTIN-202ENST00000248420 CD4P01730 458 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 SLC4A1P02730 911 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 NCK1P16333 377 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 CCR3P51677 355 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 FOXA1P55317 472 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 TRAP1Q12931 704 aaKnown RBP20.18■□□□□ 0.82
CACTIN-202ENST00000248420 MAPRE2Q15555 327 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 FGD3Q5JSP0 725 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 TMEM26Q6ZUK4 368 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 ERMP1Q7Z2K6 904 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 ZNF554Q86TJ5 538 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 BBS5Q8N3I7 341 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 OR52K2Q8NGK3 314 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 PPTC7Q8NI37 304 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 DPF3Q92784 378 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 NTAN1Q96AB6 310 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 PLEKHG4BQ96PX9 1271 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 AKTIPQ9H8T0 292 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.18■□□□□ 0.82
CACTIN-202ENST00000248420 WDR90Q96KV7 1748 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 PLXNA1Q9UIW2 1896 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 A0A0J9YYE9 177 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 MTSS1O43312 755 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 IMPDH2P12268 514 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 CLCN2P51788 898 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 ESRRGP62508 458 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 TMEM207Q6UWW9 146 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 CNTN4Q8IWV2 1026 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 CMTR2Q8IYT2 770 aaKnown RBP20.18■□□□□ 0.82
CACTIN-202ENST00000248420 C2CD4AQ8NCU7 369 aaPredicted RBP20.18■□□□□ 0.82
CACTIN-202ENST00000248420 CXorf21Q9HAI6 301 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 SARDHQ9UL12 918 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 CRYL1Q9Y2S2 319 aa20.18■□□□□ 0.82
CACTIN-202ENST00000248420 MERTKQ12866 999 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 GRB7Q14451 532 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 NEDD8Q15843 81 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 SV2CQ496J9 727 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 TAC4Q86UU9 113 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 ALDH16A1Q8IZ83 802 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 ATPAF2Q8N5M1 289 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 GSTO2Q9H4Y5 243 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 SQORQ9Y6N5 450 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 A0A0G2JLL6 359 aaPredicted RBP20.17■□□□□ 0.82
CACTIN-202ENST00000248420 DHRS12A0PJE2 317 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 H0YJX3 145 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 HLA-DQB2P05538 268 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 CAPN3P20807 821 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 BDNFP23560 247 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 MAXP61244 160 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 LARP4Q71RC2 724 aaKnown RBP eCLIP20.17■□□□□ 0.82
CACTIN-202ENST00000248420 PRRT2Q7Z6L0 340 aaPredicted RBP20.17■□□□□ 0.82
CACTIN-202ENST00000248420 ANKFN1Q8N957 763 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 DNAJB3Q8WWF6 145 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 UHRF1Q96T88 793 aaPredicted RBP20.17■□□□□ 0.82
CACTIN-202ENST00000248420 EML4Q9HC35 981 aaKnown RBP20.17■□□□□ 0.82
CACTIN-202ENST00000248420 GLOD4Q9HC38 313 aa20.17■□□□□ 0.82
CACTIN-202ENST00000248420 AAR2Q9Y312 384 aaKnown RBP20.17■□□□□ 0.82
CACTIN-202ENST00000248420 B4GAT1O43505 415 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 BMP10O95393 424 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 BMP2P12643 396 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 DNAJB13P59910 316 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 PFKPQ01813 784 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 SCAPQ12770 1279 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 FUT11Q495W5 492 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 OGFOD2Q6N063 350 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 LYSMD3Q7Z3D4 306 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 DEFB132Q7Z7B7 95 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 LZTR1Q8N653 840 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 DNAJB14Q8TBM8 379 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 KCTD13Q8WZ19 329 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 THAP11Q96EK4 314 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 C19orf60Q96EN9 201 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 SLC9A7Q96T83 725 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 VAT1Q99536 393 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 MRPL40Q9NQ50 206 aaKnown RBP20.16■□□□□ 0.82
CACTIN-202ENST00000248420 RBM22Q9NW64 420 aaKnown RBP eCLIP20.16■□□□□ 0.82
CACTIN-202ENST00000248420 USP22Q9UPT9 525 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 BTRCQ9Y297 605 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 A0A087WXM4 84 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 EI24O14681 340 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 HSPA8P11142 646 aaKnown RBP20.16■□□□□ 0.82
CACTIN-202ENST00000248420 CDKN2DP55273 166 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 SH3BP2P78314 561 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 SMYD1Q8NB12 490 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 HM13Q8TCT9 377 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 TOP1MTQ969P6 601 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 NSUN5Q96P11 429 aaKnown RBP20.16■□□□□ 0.82
CACTIN-202ENST00000248420 NPLQ9BXD5 320 aaPredicted RBP20.16■□□□□ 0.82
CACTIN-202ENST00000248420 SLC39A8Q9C0K1 460 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 GPRC5DQ9NZD1 345 aa20.16■□□□□ 0.82
CACTIN-202ENST00000248420 A0A087X1B8 175 aa20.15■□□□□ 0.82
CACTIN-202ENST00000248420 INPP4BO15327 924 aa20.15■□□□□ 0.82
CACTIN-202ENST00000248420 GPX3P22352 226 aa20.15■□□□□ 0.82
CACTIN-202ENST00000248420 CASP2P42575 452 aa20.15■□□□□ 0.82
CACTIN-202ENST00000248420 MAGEA10P43363 369 aaPredicted RBP20.15■□□□□ 0.82
CACTIN-202ENST00000248420 STX1BP61266 288 aa20.15■□□□□ 0.82
CACTIN-202ENST00000248420 TUBA4AP68366 448 aa20.15■□□□□ 0.82
CACTIN-202ENST00000248420 BNIP3Q12983 259 aa20.15■□□□□ 0.82
CACTIN-202ENST00000248420 ZBED5Q49AG3 693 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms