RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 ITGADQ13349 1161 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 SAMD4BQ5PRF9 694 aaKnown RBP16.93■□□□□ 0.3
SGPP1-201ENST00000247225 SMOQ99835 787 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 DGCR6LQ9BY27 220 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 MUC3BQ9H195 1237 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 EML4Q9HC35 981 aaKnown RBP16.93■□□□□ 0.3
SGPP1-201ENST00000247225 LTB4R2Q9NPC1 389 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 CRTAC1Q9NQ79 661 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 UBXN8O00124 270 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 HMGB2P26583 209 aaKnown RBP16.93■□□□□ 0.3
SGPP1-201ENST00000247225 GGT5P36269 586 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 MAGEA10P43363 369 aaPredicted RBP16.93■□□□□ 0.3
SGPP1-201ENST00000247225 DIO3P55073 304 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 GRAMD4Q6IC98 578 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 PATL1Q86TB9 770 aaKnown RBP16.93■□□□□ 0.3
SGPP1-201ENST00000247225 CRYBG2Q8N1P7 616 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 ADI1Q9BV57 179 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 SLC39A8Q9C0K1 460 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 SELENONQ9NZV5 590 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 FBXW11Q9UKB1 542 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 CD247P20963 164 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 RPS12P25398 132 aaKnown RBP16.93■□□□□ 0.3
SGPP1-201ENST00000247225 WNT3AP56704 352 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 BEX3Q00994 111 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 BFSP2Q13515 415 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 NFYCQ13952 458 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 DNAJC14Q6Y2X3 702 aaPredicted RBP16.93■□□□□ 0.3
SGPP1-201ENST00000247225 SNX29P2Q8IUI4 249 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 KLHL23Q8NBE8 558 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 ISOC1Q96CN7 298 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 ZNF419Q96HQ0 510 aaPredicted RBP16.93■□□□□ 0.3
SGPP1-201ENST00000247225 SLC25A23Q9BV35 468 aa16.93■□□□□ 0.3
SGPP1-201ENST00000247225 WDR6Q9NNW5 1121 aaKnown RBP16.93■□□□□ 0.3
SGPP1-201ENST00000247225 PTGES3LE9PB15 166 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 UBFD1O14562 309 aaKnown RBP16.92■□□□□ 0.3
SGPP1-201ENST00000247225 TOR1BO14657 336 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 PIP5K1BO14986 540 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 KPNA6O60684 536 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 PENKP01210 267 aaPredicted RBP16.92■□□□□ 0.3
SGPP1-201ENST00000247225 CD4P01730 458 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 HLA-DQB2P05538 268 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 FASP25445 335 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 PSMA4P25789 261 aaKnown RBP16.92■□□□□ 0.3
SGPP1-201ENST00000247225 DAOAP59103 153 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 PMS2P3Q13401 168 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 IMPG1Q17R60 797 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 SV2CQ496J9 727 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 PERM1Q5SV97 790 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 TCF12Q99081 682 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 C16orf70Q9BSU1 422 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 PFDN4Q9NQP4 134 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 SLAMF8Q9P0V8 285 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 ANKRD6Q9Y2G4 727 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 FADS3Q9Y5Q0 445 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 GOLGA4Q13439 2230 aaKnown RBP16.92■□□□□ 0.3
SGPP1-201ENST00000247225 SUPT3HB4E1H0 165 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 AGRPO00253 132 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 CNMDO75829 334 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 SNAP29O95721 258 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 POMCP01189 267 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 PAMP19021 973 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 MAPRE2Q15555 327 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 DCAF4L1Q3SXM0 396 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 MARCH8Q5T0T0 291 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 CLEC4FQ8N1N0 589 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 LRRC52Q8N7C0 313 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 PCYOX1LQ8NBM8 494 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 OR2T34Q8NGX1 318 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 OR2T3Q8NH03 318 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 ITFG2Q969R8 447 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 ACOX2Q99424 681 aa16.92■□□□□ 0.3
SGPP1-201ENST00000247225 NME4O00746 187 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 TREHO43280 583 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 APOFQ13790 326 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 LRP8Q14114 963 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 SQLEQ14534 574 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 TICAM1Q8IUC6 712 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 OR10Q1Q8NGQ4 319 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 C19orf60Q96EN9 201 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 GLOD4Q9HC38 313 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.91■□□□□ 0.3
SGPP1-201ENST00000247225 TRHDEQ9UKU6 1024 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 A0A0U1RQS6 177 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 B3GAT3O94766 335 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 ARNTP27540 789 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 ELK4P28324 431 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 SLC7A1P30825 629 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 ARSDP51689 593 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 EMP3P54852 163 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 CIR1Q86X95 450 aaPredicted RBP16.91■□□□□ 0.3
SGPP1-201ENST00000247225 ERI1Q8IV48 349 aaKnown RBP16.91■□□□□ 0.3
SGPP1-201ENST00000247225 TBATAQ96M53 351 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 ZFYVE28Q9HCC9 887 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 PCDH12Q9NPG4 1184 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 TIMMDC1Q9NPL8 285 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 MARCH4Q9P2E8 410 aaPredicted RBP16.91■□□□□ 0.3
SGPP1-201ENST00000247225 AAR2Q9Y312 384 aaKnown RBP16.91■□□□□ 0.3
SGPP1-201ENST00000247225 NDUFAF1Q9Y375 327 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 TOMM70O94826 608 aa16.91■□□□□ 0.3
SGPP1-201ENST00000247225 LTA4HP09960 611 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms