RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 AXIN1O15169 862 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 MLNP12872 115 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 ELK3P41970 407 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 CRADDP78560 199 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 CRY1Q16526 586 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 CERCAMQ5T4B2 595 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 HDXQ7Z353 690 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 PTAR1Q7Z6K3 402 aaPredicted RBP11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 IL17RCQ8NAC3 791 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 FATE1Q969F0 183 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 SERPINB12Q96P63 405 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 DOLKQ9UPQ8 538 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 A0A087WUV0 522 aaPredicted RBP11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 TMEM221A6NGB7 291 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 M0R296 226 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 HNRNPLP14866 589 aaKnown RBP eCLIP11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 SUOXP51687 545 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 CSTF1Q05048 431 aaKnown RBP11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 ZDHHC20Q5W0Z9 365 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 PRR23BQ6ZRT6 265 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 ZCCHC9Q8N567 271 aaKnown RBP11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 BRSK1Q8TDC3 778 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 PAPLNO95428 1278 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 ALPIP09923 528 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 PGAM1P18669 254 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 VIPR1P32241 457 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 TRAF2Q12933 501 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 KLHL38Q2WGJ6 581 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 CCNI2Q6ZMN8 369 aaPredicted RBP11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 ZNF572Q7Z3I7 529 aaPredicted RBP11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 TDRD1Q9BXT4 1180 aaKnown RBP11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 INVSQ9Y283 1065 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 OR51B4Q9Y5P0 310 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 CCDC151A5D8V7 595 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 VAPBO95292 243 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 ATP5DP30049 168 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 ATXN3P54252 364 aaPredicted RBP11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 VSNL1P62760 191 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 KYNUQ16719 465 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 SIRPB2Q5JXA9 342 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 CES3Q6UWW8 571 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 Q6ZS52 159 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 RAPH1Q70E73 1250 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 TEX26Q8N6G2 289 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 EDAQ92838 391 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 KLK6Q92876 244 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 OXNAD1Q96HP4 312 aaPredicted RBP11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 TSSK1BQ9BXA7 367 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 ZCCHC2Q9C0B9 1178 aaKnown RBP11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 FAM83DQ9H4H8 585 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 ASB8Q9H765 288 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 SARS2Q9NP81 518 aaKnown RBP11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 STARD13Q9Y3M8 1113 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 PLXNA3P51805 1871 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 FANCGO15287 622 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 HTR1BP28222 390 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 RGRP47804 291 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 DHPSP49366 369 aaPredicted RBP11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 SKOR1P84550 965 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 KRT71Q3SY84 523 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 TRMT10CQ7L0Y3 403 aaKnown RBP11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 TAX1BP1Q86VP1 789 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 OR4K2Q8NGD2 314 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 AP2M1Q96CW1 435 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 CYTH2Q99418 400 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 NSMCE4AQ9NXX6 385 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 B4GALT6Q9UBX8 382 aa11.17□□□□□ -0.62
TNFAIP3-201ENST00000237289 CXorf51AA0A1B0GTR3 108 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 TSPAN6O43657 245 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 AVILO75366 819 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 ZNF30P17039 623 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 ITGB7P26010 798 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 AKT2P31751 481 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 RNASEH2BQ5TBB1 312 aaKnown RBP11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 TMEM215Q68D42 235 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 PTRHD1Q6GMV3 140 aaKnown RBP11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 PLPP6Q8IY26 295 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 RTP4Q96DX8 246 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 ALG14Q96F25 216 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 GPR174Q9BXC1 333 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 PCDH12Q9NPG4 1184 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 FAM8A1Q9UBU6 413 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 OPA1O60313 960 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 MMP20O60882 483 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 ADRB3P13945 408 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 MSH3P20585 1137 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 RPL6Q02878 288 aaKnown RBP11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 ITGA9Q13797 1035 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 ANKRD22Q5VYY1 191 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 FAM167BQ9BTA0 163 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 OSBPL6Q9BZF3 934 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 PDFQ9HBH1 243 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 SYBUQ9NX95 663 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 ZNF711Q9Y462 761 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 MTCL1Q9Y4B5 1905 aaKnown RBP11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 K7EQS6 105 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 WNT9AO14904 365 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 CD68P34810 354 aaPredicted RBP11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 CNTN1Q12860 1018 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms