RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 TRAP1Q12931 704 aaKnown RBP20.36■□□□□ 0.85
RCN1-201ENST00000054950 KIF19Q2TAC6 998 aa20.36■□□□□ 0.85
RCN1-201ENST00000054950 XKR4Q5GH76 650 aa20.36■□□□□ 0.85
RCN1-201ENST00000054950 SAMD4BQ5PRF9 694 aaKnown RBP20.36■□□□□ 0.85
RCN1-201ENST00000054950 GPR158Q5T848 1215 aa20.36■□□□□ 0.85
RCN1-201ENST00000054950 C3orf58Q8NDZ4 430 aa20.36■□□□□ 0.85
RCN1-201ENST00000054950 PGAP3Q96FM1 320 aaPredicted RBP20.36■□□□□ 0.85
RCN1-201ENST00000054950 MUC3BQ9H195 1237 aa20.36■□□□□ 0.85
RCN1-201ENST00000054950 CDC14AQ9UNH5 594 aa20.36■□□□□ 0.85
RCN1-201ENST00000054950 NYNRINQ9P2P1 1898 aaKnown RBP20.35■□□□□ 0.85
RCN1-201ENST00000054950 ENTPD1P49961 510 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 POU4F1Q01851 419 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 VPS26BQ4G0F5 336 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 RAB41Q5JT25 222 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 C8orf82Q6P1X6 216 aaPredicted RBP20.35■□□□□ 0.85
RCN1-201ENST00000054950 OR2T34Q8NGX1 318 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 OR2T3Q8NH03 318 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 DQX1Q8TE96 717 aaKnown RBP20.35■□□□□ 0.85
RCN1-201ENST00000054950 DCPSQ96C86 337 aaKnown RBP20.35■□□□□ 0.85
RCN1-201ENST00000054950 TSGA13Q96PP4 275 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 UHRF1Q96T88 793 aaPredicted RBP20.35■□□□□ 0.85
RCN1-201ENST00000054950 PAAF1Q9BRP4 392 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 SLC25A23Q9BV35 468 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 CLK4Q9HAZ1 481 aaKnown RBP20.35■□□□□ 0.85
RCN1-201ENST00000054950 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.35■□□□□ 0.85
RCN1-201ENST00000054950 KCNH4Q9UQ05 1017 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 TREHO43280 583 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 LTA4HP09960 611 aaKnown RBP20.35■□□□□ 0.85
RCN1-201ENST00000054950 PGFP49763 221 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 CDKN2DP55273 166 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 MAXP61244 160 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 MAP7D1Q3KQU3 841 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 PAN2Q504Q3 1202 aaKnown RBP20.35■□□□□ 0.85
RCN1-201ENST00000054950 DCLRE1AQ6PJP8 1040 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 LARP4Q71RC2 724 aaKnown RBP eCLIP20.35■□□□□ 0.85
RCN1-201ENST00000054950 ANKRD13AQ8IZ07 590 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 TFAP2CQ92754 450 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 TOP1MTQ969P6 601 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 MPP6Q9NZW5 540 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 TTC3P53804 2025 aa20.35■□□□□ 0.85
RCN1-201ENST00000054950 H0YJX3 145 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 ANXA9O76027 345 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 OXTRP30559 389 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 GJA5P36382 358 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 TBCELQ5QJ74 424 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 TWF2Q6IBS0 349 aaKnown RBP20.34■□□□□ 0.85
RCN1-201ENST00000054950 RYBPQ8N488 228 aaPredicted RBP20.34■□□□□ 0.85
RCN1-201ENST00000054950 SLC16A10Q8TF71 515 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 EML4Q9HC35 981 aaKnown RBP20.34■□□□□ 0.85
RCN1-201ENST00000054950 MAP10Q9P2G4 905 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 RBM47A0AV96 593 aaKnown RBP20.34■□□□□ 0.85
RCN1-201ENST00000054950 SIX3O95343 332 aaPredicted RBP20.34■□□□□ 0.85
RCN1-201ENST00000054950 SLC4A1P02730 911 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 CCNCP24863 283 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 CLCN2P51788 898 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 CLCNKBP51801 687 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 FOXA1P55317 472 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 FBXO48Q5FWF7 155 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 PRAMEF19Q5SWL8 479 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 HECTD2Q5U5R9 776 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 AGAP9Q5VTM2 703 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 FAM45BPQ6NSW5 357 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 PPP4R4Q6NUP7 873 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 ERMP1Q7Z2K6 904 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 KLHDC8BQ8IXV7 354 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 OFCC1Q8IZS5 231 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 GPC2Q8N158 579 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 SHCBP1Q8NEM2 672 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 SCAMP5Q8TAC9 235 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 FAM45AQ8TCE6 357 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 FBXL20Q96IG2 436 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 KCNA7Q96RP8 456 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 IL12RB2Q99665 862 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 SOX17Q9H6I2 414 aaPredicted RBP20.34■□□□□ 0.85
RCN1-201ENST00000054950 AKTIPQ9H8T0 292 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 RRN3Q9NYV6 651 aa20.34■□□□□ 0.85
RCN1-201ENST00000054950 ANKRD12Q6UB98 2062 aa20.33■□□□□ 0.85
RCN1-201ENST00000054950 DYNC1LI2O43237 492 aaPredicted RBP20.33■□□□□ 0.85
RCN1-201ENST00000054950 APLP1P51693 650 aa20.33■□□□□ 0.85
RCN1-201ENST00000054950 KIAA0930Q6ICG6 404 aaPredicted RBP20.33■□□□□ 0.85
RCN1-201ENST00000054950 ANKFN1Q8N957 763 aa20.33■□□□□ 0.85
RCN1-201ENST00000054950 OR52K2Q8NGK3 314 aa20.33■□□□□ 0.85
RCN1-201ENST00000054950 C19orf60Q96EN9 201 aa20.33■□□□□ 0.85
RCN1-201ENST00000054950 CDCA5Q96FF9 252 aa20.33■□□□□ 0.85
RCN1-201ENST00000054950 TCF12Q99081 682 aa20.33■□□□□ 0.85
RCN1-201ENST00000054950 EFHD1Q9BUP0 239 aa20.33■□□□□ 0.85
RCN1-201ENST00000054950 UPF3AQ9H1J1 476 aaKnown RBP20.33■□□□□ 0.85
RCN1-201ENST00000054950 MRPL40Q9NQ50 206 aaKnown RBP20.33■□□□□ 0.85
RCN1-201ENST00000054950 PLXNB2O15031 1838 aa20.33■□□□□ 0.84
RCN1-201ENST00000054950 A0A0J9YYE9 177 aa20.33■□□□□ 0.84
RCN1-201ENST00000054950 AP3B1O00203 1094 aa20.33■□□□□ 0.84
RCN1-201ENST00000054950 PSMD3O43242 534 aa20.33■□□□□ 0.84
RCN1-201ENST00000054950 MOCS2O96007 188 aaPredicted RBP20.33■□□□□ 0.84
RCN1-201ENST00000054950 PAMP19021 973 aa20.33■□□□□ 0.84
RCN1-201ENST00000054950 CAPN3P20807 821 aa20.33■□□□□ 0.84
RCN1-201ENST00000054950 GPX3P22352 226 aa20.33■□□□□ 0.84
RCN1-201ENST00000054950 BDNFP23560 247 aa20.33■□□□□ 0.84
RCN1-201ENST00000054950 KPNA2P52292 529 aaKnown RBP20.33■□□□□ 0.84
RCN1-201ENST00000054950 GRB7Q14451 532 aa20.33■□□□□ 0.84
RCN1-201ENST00000054950 PSMD5Q16401 504 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms