RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Lrrc8bQ5DU41 803 aa7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 ScinQ60604 715 aa7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 Stard3Q61542 446 aa7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 Foxj1Q61660 421 aa7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 Nfe2l1Q61985 741 aa7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 Atp2a3Q64518 1038 aa7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 Atg16l2Q6KAU8 623 aa7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 Bcas1Q80YN3 633 aa7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 Mapk8Q91Y86 384 aa7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 Lrrc17Q9CXD9 443 aa7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 Cdyl2Q9D5D8 503 aa7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 Nkx2-4Q9EQM3 354 aa7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 Fzd2Q9JIP6 570 aa7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 Habp4Q9JKS5 411 aaKnown RBP7.55□□□□□ -1.2
Usp40-204ENSMUST00000187758 Gm13101A2ASJ0 481 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 VimP20152 466 aaKnown RBP7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Ybx1P62960 322 aaKnown RBP7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Ankmy2Q3TPE9 440 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 HecaQ3V1N5 544 aaKnown RBP7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Bcl2l1Q64373 233 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Wnt8aQ64527 354 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Ripor1Q68FE6 1223 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Dsg1bQ7TSF1 1060 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Mtmr12Q80TA6 747 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Rassf6Q80UQ2 353 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Fam72aQ8BFZ8 149 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Slc43a1Q8BSM7 564 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Mill2Q8HWE5 355 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 OlahQ8R197 265 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Art3Q8R2G4 371 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Vps39Q8R5L3 886 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Spc24Q9D083 201 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Oma1Q9D8H7 521 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Znf654Q9DAU9 571 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Tnfrsf14A0A1W2P7D5 276 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Ttll11A4Q9F4 727 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Vmn2r104E9Q2J5 860 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Snrpd1P62315 119 aaKnown RBP7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Ranbp9P69566 653 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Prss55Q14BX2 321 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Nudt18Q3U2V3 323 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Nxpe4Q52KP5 543 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Arhgap44Q5SSM3 814 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 BadQ61337 204 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Casc4Q6P2L7 435 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Ptk7Q8BKG3 1062 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 MylipQ8BM54 445 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Dhcr24Q8VCH6 516 aaKnown RBP7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Pcdha6Q91Y14 946 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Grk2Q99MK8 689 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Mrfap1Q9CQL7 125 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Tchhl1Q9D3P1 638 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Il20Q9JKV9 176 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Orc1Q9Z1N2 840 aaKnown RBP7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Mroh7A2AVR2 1279 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Fam46dB1ATX6 390 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Ddx43D3Z6P9 646 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Tsga10ipF7A1F0 157 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Tnk2O54967 1055 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Klc2O88448 599 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 SpnP15702 395 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Ca3P16015 260 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 NcstnP57716 708 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Adra1dP97714 562 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 VegfcP97953 415 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 DhpsQ3TXU5 369 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 CamkmtQ3U2J5 323 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Naf1Q3UMQ8 489 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 HadhQ61425 314 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Amer3Q6NS69 780 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Ints6Q6PCM2 883 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Naif1Q6PFD7 327 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Exoc3l1Q8BI71 739 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 MtbpQ8BJS8 894 aaKnown RBP7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Mettl3Q8C3P7 580 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Defb36Q8K3U4 67 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Lrrc42Q8R2U7 421 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Camkk1Q8VBY2 505 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Dnajc3Q91YW3 504 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Zmynd10Q99ML0 440 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Ssu72Q9CY97 194 aaKnown RBP7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Mxra7Q9CZH7 178 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 EefsecQ9JHW4 583 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Pard6bQ9JK83 371 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Kif9Q9WV04 790 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Asb4Q9WV71 426 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Myo18aQ9JMH9 2050 aaKnown RBP7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Shroom3Q9QXN0 1986 aa7.54□□□□□ -1.2
Usp40-204ENSMUST00000187758 Adamts14E9PX39 1209 aa7.53□□□□□ -1.2
Usp40-204ENSMUST00000187758 Syngr1O55100 234 aa7.53□□□□□ -1.2
Usp40-204ENSMUST00000187758 Cxcr3O88410 367 aa7.53□□□□□ -1.2
Usp40-204ENSMUST00000187758 Cdh1P09803 884 aa7.53□□□□□ -1.2
Usp40-204ENSMUST00000187758 UmpsP13439 481 aaKnown RBP7.53□□□□□ -1.2
Usp40-204ENSMUST00000187758 ErgP81270 486 aa7.53□□□□□ -1.2
Usp40-204ENSMUST00000187758 Fbxw18Q3TSA9 469 aa7.53□□□□□ -1.2
Usp40-204ENSMUST00000187758 Zfp560Q3URI6 754 aa7.53□□□□□ -1.2
Usp40-204ENSMUST00000187758 Tmem255bQ5FW56 369 aa7.53□□□□□ -1.2
Usp40-204ENSMUST00000187758 Brsk1Q5RJI5 778 aa7.53□□□□□ -1.2
Usp40-204ENSMUST00000187758 Hs3st2Q673U1 367 aa7.53□□□□□ -1.2
Usp40-204ENSMUST00000187758 Gpr21Q8BX79 349 aa7.53□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms