RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 MregQ6NVG5 214 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 2700097O09RikQ6PGK3 301 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mis18bp1Q80WQ8 998 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 CatsperzQ9CQP8 194 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Grm3Q9QYS2 879 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Cdh13Q9WTR5 714 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Stk25Q9Z2W1 426 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Slc4a11A2AJN7 862 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Kcnj2P35561 428 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Stard3Q61542 446 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Adcy4Q91WF3 1077 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Kdelc1Q9JHP7 502 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Bace2Q9JL18 514 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Trpc4apQ9JLV2 797 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Pld1Q9Z280 1074 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm12394A2AKP6 982 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Zcchc7B1AX39 541 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mtmr12Q80TA6 747 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Camk1dQ8BW96 385 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Cnot6Q8K3P5 557 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 GaleQ8R059 347 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 ZwilchQ8R060 589 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ppa2Q91VM9 330 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ecrg4Q99LS0 148 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm10477F6SW83 55 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Defa8P50706 81 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Cyp2c38P56655 490 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Inf2Q0GNC1 1273 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Dennd1bQ3U1T9 766 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Adora2bQ60614 332 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Hist2h2acQ64523 129 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Hist2h2aa1Q6GSS7 130 aaKnown RBP15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Rmnd5aQ80YQ8 391 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Znf451Q8C0P7 1056 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Tp53inp2Q8CFU8 221 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gtf2h3Q8VD76 309 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 DarsQ922B2 501 aaKnown RBP15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gins4Q99LZ3 223 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 4930524N10RikQ9D519 233 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 AurkcO88445 282 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 PargO88622 969 aaKnown RBP15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Surf2P09926 257 aaKnown RBP15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Tap2P36371 702 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Nploc4P60670 608 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mfsd3Q5U419 412 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Cntn2Q61330 1040 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Smpd4Q6ZPR5 823 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Marc1Q9CW42 340 aa15.61■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ankrd31A0A140LI88 1765 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Pole2O54956 527 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Scrg1O88745 98 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Yme1l1O88967 715 aaKnown RBP15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ephb3P54754 993 aaKnown RBP15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Kansl1lQ5DTI6 991 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 AgpsQ8C0I1 645 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Tmc7Q8C428 726 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mtg1Q8R2R6 326 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Dpy30Q99LT0 99 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 ArskQ9D2L1 553 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 TtpalQ9D3D0 343 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 4930513O06RikQ9D549 161 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ifrd2Q9D8U0 441 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ndel1Q9ERR1 345 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Kif13bA0A286YCV9 1847 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ttll11A4Q9F4 727 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 DsppP97399 934 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Cep44Q5HZK1 386 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 SyncripQ7TMK9 623 aaKnown RBP15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 1700001J03RikQ80ZR8 219 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Plcl2Q8K394 1128 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Rsl24d1Q99L28 163 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Slc25a19Q9DAM5 318 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Actl7bQ9QY83 418 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm5751A2AHC8 147 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Tnk2O54967 1055 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 InvsO89019 1062 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ldb1P70662 411 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Olfr1062Q7TR71 315 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 ZfatQ7TS63 1237 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 BsndQ8VIM4 307 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Trim13Q9CYB0 407 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Myh11O08638 1972 aa15.6■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Pgk1P09411 417 aaKnown RBP15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ces2aQ8QZR3 558 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 KmoQ91WN4 479 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Arpc2Q9CVB6 300 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ddx28Q9CWT6 540 aaKnown RBP15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Exoc2Q9D4H1 924 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Lrrc34Q9DAM1 415 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Cacna1sQ02789 1880 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 S100zB9EJL3 99 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Vmn2r44L7N2E1 861 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Olfm1O88998 485 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Tex13c3Q810P0 219 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Xylt1Q811B1 953 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Lin52Q8CD94 116 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Pgm3Q9CYR6 542 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mfsd10Q9D2V8 456 aaKnown RBP15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Syvn1Q9DBY1 612 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Rfx5Q9JL61 658 aa15.59■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms