RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Kansl2Q8BQR4 486 aa18.41■□□□□ 0.54
Trim47-202ENSMUST00000106441 Suds3Q8BR65 328 aa18.41■□□□□ 0.54
Trim47-202ENSMUST00000106441 Grsf1Q8C5Q4 479 aaKnown RBP18.41■□□□□ 0.54
Trim47-202ENSMUST00000106441 PigxQ99LV7 254 aa18.41■□□□□ 0.54
Trim47-202ENSMUST00000106441 Tex19.1Q99MV2 351 aa18.41■□□□□ 0.54
Trim47-202ENSMUST00000106441 Lrrc4Q99PH1 652 aa18.41■□□□□ 0.54
Trim47-202ENSMUST00000106441 Bcas2Q9D287 225 aa18.41■□□□□ 0.54
Trim47-202ENSMUST00000106441 MajinQ9D992 256 aa18.41■□□□□ 0.54
Trim47-202ENSMUST00000106441 Chek2Q9Z265 546 aa18.41■□□□□ 0.54
Trim47-202ENSMUST00000106441 Pcna-ps2A0A140T8V5 261 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Gm14401A2ARV7 303 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Skint1A7TZE6 364 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 PcnaP17918 261 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Resp18P47939 175 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 RabggtbP53612 339 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Mpp1P70290 466 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Msx2Q03358 267 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Pitpnm3Q3UHE1 974 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Scn2bQ56A07 215 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Glp2rQ5IXF8 512 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Znf512Q69Z99 562 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Gpsm1Q6IR34 673 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Ggnbp1Q6K1E7 370 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Mvb12bQ6KAU4 317 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Deup1Q7M6Y5 601 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Asb14Q8C6Y6 587 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Slc46a2Q8CA03 479 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Syn3Q8JZP2 579 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Vmn1r213Q8R278 384 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Ssxb1Q9CPU1 170 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Gm36028A0A0U1RPM1 299 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Olfr839-ps1A0A1D5RMH6 312 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 JhyE9Q793 770 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Gm6408J3QNG1 320 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Gm3402K7N5P2 326 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 OmdO35103 423 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Sypl2O89104 264 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Camk4P08414 469 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Hoxd8P23463 289 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Adra2bP30545 450 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 FynP39688 537 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 NxnP97346 435 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Cd36Q08857 472 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 TceancQ3US16 359 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Nr1h2Q60644 446 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 JrkQ60976 557 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Mtnr1aQ61184 353 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 TbcdQ8BYA0 1196 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Bhlhe22Q8C6A8 355 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Otud7aQ8R554 926 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Sec16bQ91XT4 1051 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Pacsin3Q99JB8 424 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Cnot11Q9CWN7 505 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Klhdc8bQ9D2D9 354 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Ten1Q9D7K2 161 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Kctd4Q9D7X1 259 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Tsga13Q9DA17 273 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 GabrqQ9JLF1 638 aa18.4■□□□□ 0.54
Trim47-202ENSMUST00000106441 Cep350E9Q309 3095 aa18.39■□□□□ 0.54
Trim47-202ENSMUST00000106441 Gm13212B1ASQ7 799 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Gm10479K7N6H4 105 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Itm2bO89051 266 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Krt4P07744 525 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 CcnfP51944 777 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Itga11P61622 1188 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 TankP70347 448 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tmem102Q3UPR7 509 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Foxd4Q60688 444 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Cntn4Q69Z26 1026 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Enpp3Q6DYE8 874 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Cfap97Q6ZPR1 541 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Pcdhb19Q91Y01 801 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 DdoQ922Z0 341 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Dctn2Q99KJ8 402 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Spg21Q9CQC8 308 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Zfp655Q9CZP3 541 aaKnown RBP18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Cyp4v2Q9DBW0 525 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Rnft1Q9DCN7 395 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Il17rbQ9JIP3 499 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Gde1Q9JL56 331 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Dbn1Q9QXS6 706 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tspan3Q9QY33 253 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Fiz1Q9WTJ4 500 aa18.39■□□□□ 0.53
Trim47-202ENSMUST00000106441 Igkv17-121A0A0G2JFA8 117 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Grem1O70326 184 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Slc26a1P58735 704 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Ctps2P70303 586 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Adamts1P97857 968 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Coq10bQ3THF9 240 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Armcx5Q3UZB0 606 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Pcid2Q8BFV2 399 aaKnown RBP18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Cops7bQ8BV13 264 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tspan14Q8QZY6 270 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Hip1Q8VD75 1029 aaKnown RBP18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Pcdhb17Q91VD8 799 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Pgm3Q9CYR6 542 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Gsdmdc1Q9D8T2 487 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 NvlQ9DBY8 855 aaKnown RBP18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 PyglQ9ET01 850 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Nme7Q9QXL8 395 aa18.38■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms