RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gm4981Q3ULJ8 291 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Has1Q61647 583 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 XpaQ64267 272 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Gja6Q6S5G4 283 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Olfr1062Q7TR71 315 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Znf423Q80TS5 1292 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Reps2Q80XA6 521 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ric8bQ80XE1 520 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Rbm22Q8BHS3 420 aaKnown RBP11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Tmem220Q8BP07 167 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Kank2Q8BX02 843 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Serpina3bQ8BYY9 420 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ston2Q8BZ60 895 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Acap1Q8K2H4 740 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Exd2Q8VEG4 650 aaKnown RBP11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Olfr532Q8VGT4 309 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Sh3d19Q91X43 789 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 OptcQ920A0 328 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Pmf1Q9CPV5 202 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Vps28Q9D1C8 221 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Timp4Q9JHB3 224 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Cngb3Q9JJZ9 694 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Abhd1Q9QZC8 412 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Celf2Q9Z0H4 508 aaKnown RBP11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Gm3147A0A0J9YU88 481 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Gm10424A0A0J9YVD0 481 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Olfr839-ps1A0A1D5RMH6 312 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Tnip3A0A1D5RMN0 279 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Klhl4B1AZR0 717 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Tmem233D3Z1U7 110 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Gm7971J3QMM8 481 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Got2P05202 430 aaKnown RBP11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 B3gat3P58158 335 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Stx1bP61264 288 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Col28a1Q2UY11 1141 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Tespa1Q3U132 458 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Tmem102Q3UPR7 509 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Gstt1Q64471 240 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Q6GQU0 248 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 CapslQ6P8Y1 208 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Serpina12Q7TMF5 413 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Zfp606Q7TSV0 794 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Dhx33Q80VY9 698 aaKnown RBP11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Q80Y73 168 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Slc7a4Q8BLQ7 635 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Pabpc5Q8C7D3 381 aaKnown RBP11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Wdr11Q8K1X1 1223 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Abhd11Q8K4F5 307 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Tbc1d19Q8VDV7 526 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 PigxQ99LV7 254 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Nudt7Q99P30 236 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Fam83dQ9D7I8 585 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Cacna1cQ01815 2139 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Vmn2r-ps130A0A140T8U3 855 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Zfp558E9Q1J0 407 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Atn1O35126 1175 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Kcnk4O88454 398 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ap2a2P17427 938 aaKnown RBP11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 CtswP56203 371 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 PrkacbP68181 351 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Cntnap5bQ0V8T8 1292 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Wdr36Q3TAQ9 899 aaKnown RBP11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 BtrcQ3ULA2 605 aaKnown RBP11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Vps51Q3UVL4 782 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Akr1clQ3UXL1 322 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Zbtb8osQ505B7 168 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Six4Q61321 775 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Arhgap30Q640N3 1101 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Gbp5Q8CFB4 590 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ppa2Q91VM9 330 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Q922R1 422 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Fbxl20Q9CZV8 436 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Mbtps1Q9WTZ2 1052 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Casp8ap2Q9WUF3 1962 aa11.62□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Klhdc7bA0A286YD60 1263 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 FancfE9Q5Z5 343 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ap3d1O54774 1199 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Hmx2P43687 273 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ppp3cbP48453 525 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Rnf19aP50636 840 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 BmxP97504 651 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 PepdQ11136 493 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Nol9Q3TZX8 714 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Thrap3Q569Z6 951 aaKnown RBP11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Six3Q62233 333 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Avpr1aQ62463 423 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ugt2a1Q80X89 528 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Lair1Q8BG84 263 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Vps39Q8R5L3 886 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ddx50Q99MJ9 734 aaKnown RBP11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Smpd3Q9JJY3 655 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Znhit2Q9QY66 399 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 CtsjQ9R014 334 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Rpl9-ps1S4R1R7 191 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Fam81bA0A140LI28 432 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Gm13941A2AJ38 245 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Gm3259D3YUK0 475 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Kcnc1P15388 511 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Pou4f1P17208 421 aa11.61□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Psmd7P26516 321 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms