RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Reep3Q99KK1 254 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 CmasQ99KK2 432 aaKnown RBP10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Erp27Q9D8U3 272 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Slfn3A0A1L1STQ7 640 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Fgf10O35565 209 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tulp3O88413 460 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Rdh7O88451 316 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Q3UTZ3 580 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mon1aQ6PDG8 556 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Myl9Q9CQ19 172 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 PyglQ9ET01 850 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Topbp1Q6ZQF0 1515 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 SmgcF6VRN1 385 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm2888K7N746 267 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Atn1O35126 1175 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Clk4O35493 481 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Rad51Q08297 339 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Hesx1Q61658 185 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pdcd4Q61823 469 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cyp3a11Q64459 504 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 GnasQ6R0H7 1133 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Olfr389Q7TRX7 312 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Trim50Q810I2 483 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Hat1Q8BY71 416 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ints10Q8K2A7 710 aaKnown RBP10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 PolbQ8K409 335 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tmem161aQ8VCA6 480 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mzb1Q9D8I1 188 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Slc7a8Q9QXW9 531 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 A930018M24RikB7ZMY3 218 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Stat5aP42230 793 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cdh8P97291 799 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gpalpp1Q69ZC8 346 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Znf821Q6PD05 413 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tecpr1Q80VP0 1166 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 4930503B20RikQ80ZP0 234 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Q8CDN1 933 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Prkd3Q8K1Y2 889 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 PiguQ8K358 434 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Snrnp25Q8VIK1 123 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pcdhb17Q91VD8 799 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ndufaf7Q9CWG8 436 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Arhgef25Q9CWR0 618 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Nudt5Q9JKX6 218 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Nup153E9Q3G8 1462 aaKnown RBP10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm7086A0A1W2P766 342 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 A0A1Y7VIU7 259 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Icam1P13597 537 aaKnown RBP10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ccnb1P24860 430 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 TubP50586 505 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Smarcd1Q61466 515 aaKnown RBP10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Slc29a2Q61672 456 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Med22Q62276 200 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ldoc1Q7TPY9 151 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cxcr1Q810W6 351 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Plekhm3Q8BM47 761 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Fam180aQ8BR21 173 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 HnrnplQ8R081 586 aaKnown RBP10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ehbp1l1Q99MS7 1716 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 MtpapQ9D0D3 585 aaKnown RBP10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 TrmuQ9DAT5 417 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 PaicsQ9DCL9 425 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ptpn23Q6PB44 1692 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Clk2O35491 499 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Hmgb3O54879 200 aaKnown RBP10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Oas1aP11928 367 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ass1P16460 412 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Dnajc11Q5U458 559 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Adora2bQ60614 332 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Stmnd1Q6P3A1 279 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Serpina3fQ80X76 445 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Rap2aQ80ZJ1 183 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Msantd1Q8BIL2 278 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Hmbox1Q8BJA3 419 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ankrd52Q8BTI7 1076 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Lrif1Q8CDD9 755 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Syne4Q8CII8 388 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Oas1gQ8K469 367 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ecrg4Q99LS0 148 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Klhl35Q9CZ49 574 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Msl3Q9WVG9 525 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm10324L7N208 604 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Nr5a2P45448 560 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cyp2c38P56655 490 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Nkx2-3P97334 362 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ccser2Q3UHI0 833 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Plin5Q8BVZ1 463 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 TdrpQ8C5P7 182 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Rhox9Q9EQM5 227 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Htr3bQ9JHJ5 437 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Psmd13Q9WVJ2 376 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Dgat1Q9Z2A7 498 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gria2P23819 883 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cdh4P39038 913 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tgtp2Q3T9E4 415 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ccdc69Q3TCJ8 202 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Otud5Q3U2S4 566 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Bbs1Q3V3N7 593 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Kcnh1Q60603 989 aa10.17□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tgtp1Q62293 415 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms