RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Scaf8Q6DID3 1268 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Ccdc116Q80X53 541 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Pex26Q8BGI5 305 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Prox2Q8BII1 593 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Slc41a1Q8BJA2 512 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Kyat1Q8BTY1 424 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 TbcdQ8BYA0 1196 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 HpdlQ8K248 371 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Mcoln3Q8R4F0 553 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 AcmsdQ8R519 336 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Stk33Q924X7 491 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gpc6Q9R087 555 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Cry2Q9R194 592 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Olfr391-psA0A0U1RNJ4 312 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Vmn2r120E9PX34 856 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Sh3pxd2aO89032 1124 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 CfhP06909 1234 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Tnni3P48787 211 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Hsd17b4P51660 735 aaKnown RBP16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 YwhaqP68254 245 aaKnown RBP16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Fam83hQ148V8 1209 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Xkr4Q5GH67 647 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Acot5Q6Q2Z6 421 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Ric8bQ80XE1 520 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Syde1Q9DBZ9 737 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Il17rbQ9JIP3 499 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Nme4Q9WV84 186 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Scn10aQ6QIY3 1958 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Vmn1r2A2AMT6 306 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Mybpc1D3YU50 1127 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 MrasO08989 208 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Slc6a13P31649 602 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Itga11P61622 1188 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Mtf2Q02395 593 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Ei24Q61070 340 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gm2163Q6PCY5 473 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Rpf1Q7TND5 349 aaKnown RBP16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Znf410Q8BKX7 478 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Aifm2Q8BUE4 373 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Arhgef33Q8BW86 850 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Ccdc92Q8VDN4 314 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Frmd4bQ920B0 1035 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Mccc1Q99MR8 717 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Chrna1P04756 457 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Serpina3kP07759 418 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 GhrP16882 650 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Slc30a3P97441 388 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Micall2Q3TN34 1009 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Parp3Q3ULW8 533 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Tmprss11eQ5S248 423 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Olfr464Q5SW48 313 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Rnf145Q5SWK7 663 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Krt72Q6IME9 520 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Tyw1Q8BJM7 721 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 DseQ8BLI4 958 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Ints10Q8K2A7 710 aaKnown RBP16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Fam49bQ921M7 324 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Tcf7l2Q924A0 459 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Slc16a6B1AT66 607 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Kcnc1P15388 511 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Fcer2P20693 331 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Alox12eP55249 662 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Fam198bQ3UPI1 517 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Znf235Q61116 645 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 BadQ61337 204 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Olfr392Q7TRX6 312 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Snx32Q80ZJ7 404 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Tmem154Q8C4Q9 181 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Adprhl2Q8CG72 370 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Elf5Q8VDK3 253 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Ttc39cQ8VE09 580 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Olfr866Q8VFI7 312 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Serpina3nQ91WP6 418 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Med10Q9CXU0 135 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 NarfQ9CYQ7 462 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 P2yr13Q9D8I2 337 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 CsadQ9DBE0 493 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Nme7Q9QXL8 395 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Fbxo8Q9QZN3 319 aa16.94■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Ndst2P52850 883 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Lim2P56563 173 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Prom2Q3UUY6 835 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Rps27lQ6ZWY3 84 aaKnown RBP16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Fut11Q8BHC9 489 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Dennd1cQ8CFK6 786 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 PxnQ8VI36 591 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 KelQ9EQF2 713 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Msl3Q9WVG9 525 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Disp2Q8CIP5 1345 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Serpine3E9Q6A2 401 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Adam19O35674 920 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Aldh1a1P24549 501 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Stt3bQ3TDQ1 823 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Apex2Q68G58 516 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Ssx9Q6XAS3 170 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 InavaQ7TN12 663 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Itih5Q8BJD1 952 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Mrpl47Q8K2Y7 252 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Colec12Q8K4Q8 742 aa16.93■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Stk32cQ8QZV4 488 aa16.93■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms