RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Gli1P47806 1111 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Hspa4lP48722 838 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 MylpfP97457 169 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pld2P97813 933 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Mylk4Q5SUV5 386 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Rnf145Q5SWK7 663 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gpr65Q61038 337 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Best2Q8BGM5 508 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Rdh13Q8CEE7 334 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 H2-Q4Q8HWB2 354 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Slco1a5Q91YY5 670 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Lrrc18Q9CQ07 262 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Arl2Q9D0J4 184 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Fam90a1bQ9D4F3 419 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pias4Q9JM05 507 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Cldn24D3YXJ9 220 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 B020004C17RikJ3QP07 232 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Rgs2O08849 211 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ap2a1P17426 977 aaKnown RBP16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Hk1P17710 974 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gria2P23819 883 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 TubP50586 505 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pag1Q3U1F9 429 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Axdnd1Q3UZ57 424 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Rab26Q504M8 260 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Clec1aQ8BWY2 269 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Asb14Q8C6Y6 587 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pde10aQ8CA95 790 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Smg8Q8VE18 991 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Oas1dQ8VI95 361 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ccdc70Q9D9B0 223 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Arid2E9Q7E2 1828 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Socs2O35717 198 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Got2P05202 430 aaKnown RBP16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 PlaaP27612 794 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Oaz1P54369 227 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Cntnap5bQ0V8T8 1292 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Mrgprb1Q3UG61 350 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ppp1r14bQ62084 147 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Rxfp1Q6R6I7 758 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Cd300lfQ6SJQ7 337 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Abcg2Q7TMS5 657 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Actr5Q80US4 605 aaKnown RBP16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Tecpr1Q80VP0 1166 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Evi2bQ8VD58 444 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Epm2aip1Q8VEH5 606 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Reep3Q99KK1 254 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Nck1Q99M51 377 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Nuf2Q99P69 463 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Mrpl17Q9D8P4 176 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Slamf1Q9QUM4 343 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Insl5Q9WUG6 135 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Msl3Q9WVG9 525 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Shroom3Q9QXN0 1986 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Vmn1r3A2AMT7 306 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Vmn2r11E9Q4X4 861 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Kcnc1P15388 511 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Jak1P52332 1153 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Faf1P54731 649 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Cyp2c39P56656 490 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pnrc1Q3TWH3 297 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Trafd1Q3UDK1 580 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Efr3bQ6ZQ18 817 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Usp43Q8BUM9 1132 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Vmn1r79Q8R285 306 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gfm2Q8R2Q4 779 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 MrgpreQ91ZB7 310 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Hao2Q9NYQ2 353 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Racgap1Q9WVM1 628 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm10424A0A0J9YVD0 481 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Olfr566A0A1B0GST0 319 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm21964A0A1W2P7S4 437 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm7971J3QMM8 481 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Eci1P42125 289 aaKnown RBP16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Tlx1P43345 332 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Muc1Q02496 630 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Treml2Q2LA85 329 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 HexdcQ3U4H6 486 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ntrk1Q3UFB7 799 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gja6Q6S5G4 283 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Abraxas1Q8BPZ8 407 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 HnrnprQ8VHM5 632 aaKnown RBP16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 PudpQ9D5U5 234 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 2010109A12RikQ9D875 119 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Olig2Q9EQW6 323 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Bmp15Q9Z0L4 392 aa16.28■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pcdh15Q99PJ1 1943 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm3147A0A0J9YU88 481 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm13941A2AJ38 245 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 SmgcF6VRN1 385 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 MrasO08989 208 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 NoctO35710 429 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Kcnk4O88454 398 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Slc2a7P0C6A1 513 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pax3P24610 479 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Rnf157Q3TEL6 685 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Syce1lQ5D525 247 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Xkr4Q5GH67 647 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Lpcat4Q6NVG1 524 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 HomezQ80W88 542 aa16.27■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms