RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 GRIA4P48058 902 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 METAP1P53582 386 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 POLR2LP62875 67 aaKnown RBP17.58■□□□□ 0.41
PHGDH-230ENST00000641927 SATB1Q01826 763 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 DHX9Q08211 1270 aaKnown RBP17.58■□□□□ 0.41
PHGDH-230ENST00000641927 SIGLEC14Q08ET2 396 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 POU6F1Q14863 301 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 MSS51Q4VC12 460 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 FAM46CQ5VWP2 391 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 BRAT1Q6PJG6 821 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 ZSWIM9Q86XI8 627 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 ZBED8Q8IZ13 594 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 NDUFAF2Q8N183 169 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 MPP5Q8N3R9 675 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 BLOC1S5Q8TDH9 187 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 EDAQ92838 391 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 ECHDC3Q96DC8 303 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 ARNT2Q9HBZ2 717 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 SIT1Q9Y3P8 196 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 SDR42E2A6NKP2 422 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 DCXO43602 365 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 ATG13O75143 517 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 PRKCGP05129 697 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 ALPIP09923 528 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 NPY2RP49146 381 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 RPL26P61254 145 aaKnown RBP17.58■□□□□ 0.4
PHGDH-230ENST00000641927 FZD5Q13467 585 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 SEPT6Q14141 434 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 CST6Q15828 149 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 QPCTQ16769 361 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 MAP9Q49MG5 647 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 LRRC73Q5JTD7 316 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 ZNF776Q68DI1 518 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-230ENST00000641927 TMEM92Q6UXU6 159 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 CEP128Q6ZU80 1094 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 TTC7BQ86TV6 843 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 PIH1D2Q8WWB5 315 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 SMIM14Q96QK8 99 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 IL22Q9GZX6 179 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 MKRN2Q9H000 416 aaKnown RBP17.58■□□□□ 0.4
PHGDH-230ENST00000641927 SLC6A17Q9H1V8 727 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 FBRSQ9HAH7 460 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 SYBUQ9NX95 663 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 SAMD15Q9P1V8 674 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 PHTF1Q9UMS5 762 aa17.58■□□□□ 0.4
PHGDH-230ENST00000641927 RPL26L1Q9UNX3 145 aaKnown RBP17.58■□□□□ 0.4
PHGDH-230ENST00000641927 CKAP5Q14008 2032 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 TCRBV21S2A2A0A5A6 115 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 C16orf96A6NNT2 1141 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 ERLIN1O75477 346 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 SLC4A1P02730 911 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 ALADP13716 330 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 ITGB7P26010 798 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 ABL2P42684 1182 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 MAGEA3P43357 314 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 COPAP53621 1224 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 CRY1Q16526 586 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 CCDC38Q502W7 563 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 FBXL19Q6PCT2 694 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 TMPRSS6Q8IU80 811 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 ANKMY2Q8IV38 441 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 DKK3Q9UBP4 350 aa17.57■□□□□ 0.4
PHGDH-230ENST00000641927 A0A0J9YYE9 177 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 A8MX80 341 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 CHURC1-FNTBB4DL54 471 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 PLK4O00444 970 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 MID1O15344 667 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 ADH1BP00325 375 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 TRBC1P01850 177 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 DCNP07585 359 aaKnown RBP17.56■□□□□ 0.4
PHGDH-230ENST00000641927 ELK3P41970 407 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 RPS14P62263 151 aaKnown RBP17.56■□□□□ 0.4
PHGDH-230ENST00000641927 SEMG2Q02383 582 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 FASTKD3Q14CZ7 662 aaKnown RBP17.56■□□□□ 0.4
PHGDH-230ENST00000641927 BRD3Q15059 726 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 PTPRRQ15256 657 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 UGP2Q16851 508 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 USP45Q70EL2 814 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 PARS2Q7L3T8 475 aaKnown RBP17.56■□□□□ 0.4
PHGDH-230ENST00000641927 SYT13Q7L8C5 426 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 GANCQ8TET4 914 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 ARRDC3Q96B67 414 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 OSBPL6Q9BZF3 934 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 POLMQ9NP87 494 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-230ENST00000641927 CHMP2BQ9UQN3 213 aa17.56■□□□□ 0.4
PHGDH-230ENST00000641927 CCDC78A2IDD5 438 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 UPK3BL1B0FP48 263 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 UPK3BL2E5RIL1 263 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 E7ESA3 106 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 EIF3HO15372 352 aaKnown RBP eCLIP17.55■□□□□ 0.4
PHGDH-230ENST00000641927 DNTTP04053 509 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 TIMP2P16035 220 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 HNF1BP35680 557 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 MAGEA4P43358 317 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 FAM193AP78312 1265 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 GAS6Q14393 721 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 SLMAPQ14BN4 828 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 EMBQ6PCB8 327 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 AGGF1Q8N302 714 aaeCLIP17.55■□□□□ 0.4
PHGDH-230ENST00000641927 FBXO36Q8NEA4 188 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms