RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 STRADBQ9C0K7 418 aa13.95□□□□□ -0.18
HLA-C-210ENST00000640219 ASNSD1Q9NWL6 643 aa13.95□□□□□ -0.18
HLA-C-210ENST00000640219 ANAPC2Q9UJX6 822 aa13.95□□□□□ -0.18
HLA-C-210ENST00000640219 REXO2Q9Y3B8 237 aaKnown RBP13.95□□□□□ -0.18
HLA-C-210ENST00000640219 HS3ST4Q9Y661 456 aa13.95□□□□□ -0.18
HLA-C-210ENST00000640219 A0A0U1RQJ8 604 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 SPTY2D1-AS1A0A0U1RR47 76 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 KCNU1A8MYU2 1149 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 NTN3O00634 580 aaPredicted RBP13.94□□□□□ -0.18
HLA-C-210ENST00000640219 ATMINO43313 823 aaPredicted RBP13.94□□□□□ -0.18
HLA-C-210ENST00000640219 RHOXF2BP0C7M4 288 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 JMJD7P0C870 316 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 UNGP13051 313 aaPredicted RBP13.94□□□□□ -0.18
HLA-C-210ENST00000640219 JUNDP17535 347 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 ATP11AP98196 1134 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 SULT2A1Q06520 285 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 KCNAB2Q13303 367 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 NNTQ13423 1086 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 CDO1Q16878 200 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 CLEC16AQ2KHT3 1053 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 HSP90B2PQ58FF3 399 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 PIP5KL1Q5T9C9 394 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 BEND5Q7L4P6 421 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 PARGQ86W56 976 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 SLC35F3Q8IY50 421 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 SYN2Q92777 582 aaPredicted RBP13.94□□□□□ -0.18
HLA-C-210ENST00000640219 NPY6RQ99463 290 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 PRMT1Q99873 361 aaKnown RBP13.94□□□□□ -0.18
HLA-C-210ENST00000640219 RHOXF2Q9BQY4 288 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 BOCQ9BWV1 1114 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 SIK2Q9H0K1 926 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 ANKZF1Q9H8Y5 726 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.94□□□□□ -0.18
HLA-C-210ENST00000640219 PLEKHB1Q9UF11 243 aaPredicted RBP13.94□□□□□ -0.18
HLA-C-210ENST00000640219 PISDQ9UG56 409 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 IPO11Q9UI26 975 aaKnown RBP13.94□□□□□ -0.18
HLA-C-210ENST00000640219 KLF15Q9UIH9 416 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 TMEM59LQ9UK28 342 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 PRDM4Q9UKN5 801 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 VANGL2Q9ULK5 521 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 SRPK3Q9UPE1 567 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 ZFR2Q9UPR6 939 aaKnown RBP13.94□□□□□ -0.18
HLA-C-210ENST00000640219 JRKLQ9Y4A0 524 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 PCDHB11Q9Y5F2 797 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 PCDHA13Q9Y5I0 950 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 HS3ST3A1Q9Y663 406 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 NBASA2RRP1 2371 aa13.94□□□□□ -0.18
HLA-C-210ENST00000640219 RP1P56715 2156 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 POM121BA6NF01 834 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 TMX2-CTNND1H3BSU7 103 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 MCF2LO15068 1137 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 ALOX15BO15296 676 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 PAGE1O75459 146 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 PCDH8O95206 1070 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 LSM8O95777 96 aaKnown RBP13.93□□□□□ -0.18
HLA-C-210ENST00000640219 GLI1P08151 1106 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 MMP8P22894 467 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 OAS2P29728 719 aaKnown RBP13.93□□□□□ -0.18
HLA-C-210ENST00000640219 NOS2P35228 1153 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 MAGEA1P43355 309 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 CCDC15Q0P6D6 951 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 SLC12A1Q13621 1099 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 FBXL22Q6P050 247 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 WDR93Q6P2C0 686 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 BORAQ6PGQ7 559 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 KYAT3Q6YP21 454 aaKnown RBP13.93□□□□□ -0.18
HLA-C-210ENST00000640219 FAM131BQ86XD5 332 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 ZFAND4Q86XD8 727 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 ATP6V0D2Q8N8Y2 350 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 BTN2A3PQ96KV6 586 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 AGPAT1Q99943 283 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 FUT8Q9BYC5 575 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 TKTL2Q9H0I9 626 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 GPR27Q9NS67 375 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 PLAAQ9Y263 795 aa13.93□□□□□ -0.18
HLA-C-210ENST00000640219 SSU72P8A0A1W2PR75 194 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 F5H5T6 163 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 POLR3GO15318 223 aaPredicted RBP13.92□□□□□ -0.18
HLA-C-210ENST00000640219 ATP9BO43861 1147 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 BNIP3LO60238 219 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 CNTN5O94779 1100 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 LCA5LO95447 670 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 PDGFRAP16234 1089 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 CCR1P32246 355 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 EIF4A3P38919 411 aaKnown RBP13.92□□□□□ -0.18
HLA-C-210ENST00000640219 POLE2P56282 527 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 DEUP1Q05D60 604 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 AUHQ13825 339 aaKnown RBP13.92□□□□□ -0.18
HLA-C-210ENST00000640219 DLG2Q15700 870 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 SEL1L3Q68CR1 1132 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 Q6ZVU0 165 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 IRF2BP2Q7Z5L9 587 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 ZNF677Q86XU0 584 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 RXFP2Q8WXD0 754 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 GFM1Q96RP9 751 aaKnown RBP13.92□□□□□ -0.18
HLA-C-210ENST00000640219 TRIM62Q9BVG3 475 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 FOXP3Q9BZS1 431 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.92□□□□□ -0.18
HLA-C-210ENST00000640219 SPASTQ9UBP0 616 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 SLC25A13Q9UJS0 675 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms