RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 SNF8Q96H20 258 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 FICDQ9BVA6 458 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 TMEM109Q9BVC6 243 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 FSD1LQ9BXM9 530 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 CHRDQ9H2X0 955 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 CNOT10Q9H9A5 744 aaKnown RBP14.56□□□□□ -0.08
LINC00339-208ENST00000634934 DLGAP2Q9P1A6 1054 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 PPM1HQ9ULR3 514 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 TPX2Q9ULW0 747 aaKnown RBP14.56□□□□□ -0.08
LINC00339-208ENST00000634934 CHKBQ9Y259 395 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 PLAAQ9Y263 795 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 TCRBV21S2A2A0A5A6 115 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 ESYT3A0FGR9 886 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 DNALI1O14645 258 aaPredicted RBP14.56□□□□□ -0.08
LINC00339-208ENST00000634934 PSMD3O43242 534 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 CA4P22748 312 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 IVDP26440 423 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 RPL21P46778 160 aaKnown RBP14.56□□□□□ -0.08
LINC00339-208ENST00000634934 RPS9P46781 194 aaKnown RBP14.56□□□□□ -0.08
LINC00339-208ENST00000634934 OLIG2Q13516 323 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 UAP1Q16222 522 aaPredicted RBP14.56□□□□□ -0.08
LINC00339-208ENST00000634934 ZNF776Q68DI1 518 aaPredicted RBP14.56□□□□□ -0.08
LINC00339-208ENST00000634934 DUPD1Q68J44 220 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 SYT13Q7L8C5 426 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 TAX1BP1Q86VP1 789 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 C10orf67Q8IYJ2 551 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 TMIEQ8NEW7 156 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 CPT1BQ92523 772 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 TADA1Q96BN2 335 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 LRIG1Q96JA1 1093 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 MRGPRX2Q96LB1 330 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 ZNF641Q96N77 438 aaPredicted RBP14.56□□□□□ -0.08
LINC00339-208ENST00000634934 KLHL32Q96NJ5 620 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 APOL2Q9BQE5 337 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 TDRD1Q9BXT4 1180 aaKnown RBP14.56□□□□□ -0.08
LINC00339-208ENST00000634934 OSBPL1AQ9BXW6 950 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 RSPH9Q9H1X1 276 aaPredicted RBP14.56□□□□□ -0.08
LINC00339-208ENST00000634934 SUV39H2Q9H5I1 410 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 LRRC40Q9H9A6 602 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 POLMQ9NP87 494 aaPredicted RBP14.56□□□□□ -0.08
LINC00339-208ENST00000634934 C2orf42Q9NWW7 574 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 RAPGEFL1Q9UHV5 662 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 SARDHQ9UL12 918 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 FAM169AQ9Y6X4 670 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 TCRBV7S3A2A0A539 114 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 C1QTNF3-AMACRE9PGA6 284 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 SOCS5O75159 536 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 USP12O75317 370 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 AP2A1O95782 977 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 AGTP01019 485 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 DGKEP52429 567 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 COPAP53621 1224 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 SATB1Q01826 763 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 CDK18Q07002 472 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 ZNF844Q08AG5 666 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 MTAPQ13126 283 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 CALCOCO2Q13137 446 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 SLC14A2Q15849 920 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 ARMC12Q5T9G4 340 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 FAM46CQ5VWP2 391 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 ANKRD22Q5VYY1 191 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 PCGF5Q86SE9 256 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 TMPRSS6Q8IU80 811 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 PPIL6Q8IXY8 311 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 SPEM1Q8N4L4 309 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 SLC25A41Q8N5S1 370 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 VOPP1Q96AW1 172 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 TBL1YQ9BQ87 522 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 MKRN2Q9H000 416 aaKnown RBP14.55□□□□□ -0.08
LINC00339-208ENST00000634934 SLC6A17Q9H1V8 727 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 FBRSQ9HAH7 460 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 DYRK4Q9NR20 520 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 ANAPC5Q9UJX4 755 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 PCDHB9Q9Y5E1 797 aa14.55□□□□□ -0.08
LINC00339-208ENST00000634934 ERI2A8K979 691 aaKnown RBP14.54□□□□□ -0.08
LINC00339-208ENST00000634934 GOLGA8MH3BSY2 632 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 TRAFD1O14545 582 aaPredicted RBP14.54□□□□□ -0.08
LINC00339-208ENST00000634934 NDUFAB1O14561 156 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 FSBPO95073 299 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 PDHA1P08559 390 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 CCT5P48643 541 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 METAP1P53582 386 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 ITGA8P53708 1063 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 EPHB1P54762 984 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 RPS14P62263 151 aaKnown RBP14.54□□□□□ -0.08
LINC00339-208ENST00000634934 GALNT3Q14435 633 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 HLTFQ14527 1009 aaKnown RBP eCLIP14.54□□□□□ -0.08
LINC00339-208ENST00000634934 KCNJ11Q14654 390 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 TRADDQ15628 312 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 CST6Q15828 149 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 TTC31Q49AM3 519 aaPredicted RBP14.54□□□□□ -0.08
LINC00339-208ENST00000634934 ZNF805Q5CZA5 627 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 RNASEH2BQ5TBB1 312 aaKnown RBP14.54□□□□□ -0.08
LINC00339-208ENST00000634934 KCTD11Q693B1 232 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 PPP1R21Q6ZMI0 780 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 PGBD3Q8N328 593 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 BBOF1Q8ND07 529 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 LPCAT1Q8NF37 534 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 TSTD1Q8NFU3 115 aa14.54□□□□□ -0.08
LINC00339-208ENST00000634934 HMGB4Q8WW32 186 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms