RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 PRKD1Q15139 912 aaPredicted RBP14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 KAZNQ674X7 775 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 RAVER1Q8IY67 606 aaKnown RBP14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 TMEM145Q8NBT3 493 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 NETO2Q8NC67 525 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 IFT43Q96FT9 208 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 SLC6A18Q96N87 628 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 SRPK1Q96SB4 655 aaKnown RBP14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 ADGRE3Q9BY15 652 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 SLC32A1Q9H598 525 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 NOD2Q9HC29 1040 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 GUCA1BQ9UMX6 200 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 TTLL3Q9Y4R7 772 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 CFAP54Q96N23 3096 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 C4orf47A7E2U8 309 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 TLR4O00206 839 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 PSMD11O00231 422 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 MUSKO15146 869 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 SLC31A1O15431 190 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 ZSCAN12O43309 604 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 PGLSO95336 258 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 RABIFP47224 123 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 MARCKSL1P49006 195 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 CSNK1EP49674 416 aaKnown RBP14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 CCT8P50990 548 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 KYAT3Q6YP21 454 aaKnown RBP14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 ERMP1Q7Z2K6 904 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 ABI3BPQ7Z7G0 1075 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 CDKL3Q8IVW4 592 aaPredicted RBP14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 PGBD5Q8N414 524 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 VOPP1Q96AW1 172 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 LRRC45Q96CN5 670 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 KLHDC7BQ96G42 594 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 HES6Q96HZ4 224 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 LGMNQ99538 433 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 FRMD8P1Q9BZ68 369 aaPredicted RBP14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 PCDH12Q9NPG4 1184 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 TRHDEQ9UKU6 1024 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 PCDHB9Q9Y5E1 797 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 CAPN6Q9Y6Q1 641 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 PLXNA2O75051 1894 aa14.1□□□□□ -0.15
SNRPA1-216ENST00000626000 A0A1B0GVT2 93 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 A0A1W2PR77 199 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 KCNK1O00180 336 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 CDX4O14627 284 aaPredicted RBP14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 MAP3K6O95382 1288 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 JCHAINP01591 159 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 CSRP1P21291 193 aaKnown RBP14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 CTSKP43235 329 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 EPHB1P54762 984 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 MAXP61244 160 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 YPEL5P62699 121 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 FAM193AP78312 1265 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 NOMO1Q15155 1222 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 ZNF423Q2M1K9 1284 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 HLA-BQ31612 363 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 TEX44Q53QW1 395 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 SEL1L2Q5TEA6 688 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 SEL1L3Q68CR1 1132 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 DPPA4Q7L190 304 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 ATL2Q8NHH9 583 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 PDCD6IPQ8WUM4 868 aaKnown RBP14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 RMDN1Q96DB5 314 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 SCRN2Q96FV2 425 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 QKIQ96PU8 341 aaKnown RBP eCLIP14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 SLC25A51Q9H1U9 297 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 GAREM1Q9H706 876 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 TRIM10Q9UDY6 481 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 ZFR2Q9UPR6 939 aaKnown RBP14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 PPP2R2CQ9Y2T4 447 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 PPIL1Q9Y3C6 166 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 PCDHGC4Q9Y5F7 938 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 RAI2Q9Y5P3 530 aa14.09□□□□□ -0.15
SNRPA1-216ENST00000626000 IGLON5A6NGN9 336 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 RNF103O00237 685 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 FLRT2O43155 660 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 LZTS3O60299 673 aaPredicted RBP14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 PCDHGA12O60330 932 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 GDF9O60383 454 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 FTCDO95954 541 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 PAK4O96013 591 aaPredicted RBP14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 HLA-DQB2P05538 268 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 ELFN1P0C7U0 828 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 PRLRP16471 622 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 ZNF30P17039 623 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 VIPR1P32241 457 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 NXPH1P58417 271 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 ARHGEF7Q14155 803 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 PTK2BQ14289 1009 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 RPS6KA1Q15418 735 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 KIF19Q2TAC6 998 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 ITPRIPL1Q6GPH6 555 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 CCDC70Q6NSX1 233 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 HTR3CQ8WXA8 447 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 ALG3Q92685 438 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 TEKT5Q96M29 485 aa14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 MCCC1Q96RQ3 725 aaPredicted RBP14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 ELF4Q99607 663 aaPredicted RBP14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 TDRD1Q9BXT4 1180 aaKnown RBP14.08□□□□□ -0.16
SNRPA1-216ENST00000626000 CARD9Q9H257 536 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms