RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 HSDL1Q3SXM5 330 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 NCBP2-AS2Q69YL0 99 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 TMEM192Q8IY95 271 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 PDPRQ8NCN5 879 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 EMID1Q96A84 441 aaPredicted RBP15.27■□□□□ 0.04
PMS1-221ENST00000624204 MRPL4Q9BYD3 311 aaKnown RBP15.27■□□□□ 0.04
PMS1-221ENST00000624204 TMEM39BQ9GZU3 492 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 MTRRQ9UBK8 725 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 EVLQ9UI08 416 aaPredicted RBP15.27■□□□□ 0.04
PMS1-221ENST00000624204 NME4O00746 187 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 CXCL8P10145 99 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 CCND2P30279 289 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 SERPINB1P30740 379 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 PSMD8P48556 350 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 ATP6AP1Q15904 470 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 CLPPQ16740 277 aaPredicted RBP15.27■□□□□ 0.04
PMS1-221ENST00000624204 SLC22A16Q86VW1 577 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 ANKRD13BQ86YJ7 626 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 KCTD15Q96SI1 283 aaPredicted RBP15.27■□□□□ 0.04
PMS1-221ENST00000624204 LTB4R2Q9NPC1 389 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 KLHL3Q9UH77 587 aa15.27■□□□□ 0.04
PMS1-221ENST00000624204 BCAS1O75363 584 aaPredicted RBP15.27■□□□□ 0.03
PMS1-221ENST00000624204 RASAL1O95294 804 aa15.27■□□□□ 0.03
PMS1-221ENST00000624204 CHEK2O96017 543 aa15.27■□□□□ 0.03
PMS1-221ENST00000624204 LCP1P13796 627 aa15.27■□□□□ 0.03
PMS1-221ENST00000624204 IL7RP16871 459 aa15.27■□□□□ 0.03
PMS1-221ENST00000624204 YBX3P16989 372 aaKnown RBP eCLIP15.27■□□□□ 0.03
PMS1-221ENST00000624204 AQP6Q13520 282 aa15.27■□□□□ 0.03
PMS1-221ENST00000624204 SLC12A1Q13621 1099 aa15.27■□□□□ 0.03
PMS1-221ENST00000624204 PODNQ7Z5L7 613 aa15.27■□□□□ 0.03
PMS1-221ENST00000624204 ZNF567Q8N184 647 aa15.27■□□□□ 0.03
PMS1-221ENST00000624204 EFHD2Q96C19 240 aaPredicted RBP15.27■□□□□ 0.03
PMS1-221ENST00000624204 OTUD5Q96G74 571 aa15.27■□□□□ 0.03
PMS1-221ENST00000624204 TUBA1CQ9BQE3 449 aa15.27■□□□□ 0.03
PMS1-221ENST00000624204 PARVBQ9HBI1 364 aa15.27■□□□□ 0.03
PMS1-221ENST00000624204 ACOT9Q9Y305 439 aa15.27■□□□□ 0.03
PMS1-221ENST00000624204 ALOX5P09917 674 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 KCNA2P16389 499 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 CCT8P50990 548 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 ARL13BQ3SXY8 428 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 MAP1SQ66K74 1059 aaPredicted RBP15.26■□□□□ 0.03
PMS1-221ENST00000624204 PMF1Q6P1K2 205 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 CCDC185Q8N715 623 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 STYXQ8WUJ0 223 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 IL12RB2Q99665 862 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 FUNDC2Q9BWH2 189 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 CHST12Q9NRB3 414 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 PTPRFP10586 1907 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 TRIM64A6NGJ6 449 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 MDM4O15151 490 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 CXCR3P49682 368 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 SEPHS1P49903 392 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 NDST1P52848 882 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 TRIM32Q13049 653 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 GOLGA7BQ2TAP0 167 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 AGAP7PQ5VUJ5 663 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 CLEC6AQ6EIG7 209 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 TMEM151AQ8N4L1 468 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 RDH11Q8TC12 318 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 ISL2Q96A47 359 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 DUS3LQ96G46 650 aaKnown RBP15.26■□□□□ 0.03
PMS1-221ENST00000624204 FEM1CQ96JP0 617 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 WDR12Q9GZL7 423 aaKnown RBP15.26■□□□□ 0.03
PMS1-221ENST00000624204 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.26■□□□□ 0.03
PMS1-221ENST00000624204 ZCWPW2A0A1B0GU75 182 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 CILPO75339 1184 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 SEC14L2O76054 403 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 VPS26BQ4G0F5 336 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 SMUG1Q53HV7 270 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 PELI3Q8N2H9 469 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 TXNDC5Q8NBS9 432 aaKnown RBP15.26■□□□□ 0.03
PMS1-221ENST00000624204 CLEC4CQ8WTT0 213 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 C8orf37Q96NL8 207 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 PRDM12Q9H4Q4 367 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 TNFRSF12AQ9NP84 129 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 ZNF302Q9NR11 478 aa15.26■□□□□ 0.03
PMS1-221ENST00000624204 MTF2Q9Y483 593 aaPredicted RBP15.26■□□□□ 0.03
PMS1-221ENST00000624204 MSI1O43347 362 aaKnown RBP15.25■□□□□ 0.03
PMS1-221ENST00000624204 CPNE6O95741 557 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 NFICP08651 508 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 SLC35E2BP0CK96 405 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 VDRP11473 427 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 SLC13A2Q13183 592 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 DACT2Q5SW24 774 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 RETREG3Q86VR2 466 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 COLGALT2Q8IYK4 626 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 AFAP1L2Q8N4X5 818 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 RNF149Q8NC42 400 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 DEFB129Q9H1M3 183 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 ATP13A3Q9H7F0 1226 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 ANKMY1Q9P2S6 941 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 PNMA8BQ9ULN7 279 aaPredicted RBP15.25■□□□□ 0.03
PMS1-221ENST00000624204 SYNPO2Q9UMS6 1093 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 ANKRD34BA5PLL1 514 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 TRIM64BA6NI03 449 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 ACOX3O15254 700 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 ARL2P36404 184 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 NDUFA5Q16718 116 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 ARHGAP17Q68EM7 881 aa15.25■□□□□ 0.03
PMS1-221ENST00000624204 R3HCC1LQ7Z5L2 792 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms