RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 DDX56Q9NY93 547 aaKnown RBP12.54□□□□□ -0.4
LINC00963-217ENST00000624009 FTSJ1Q9UET6 329 aa12.54□□□□□ -0.4
LINC00963-217ENST00000624009 GGT7Q9UJ14 662 aa12.54□□□□□ -0.4
LINC00963-217ENST00000624009 BTBD3Q9Y2F9 522 aa12.54□□□□□ -0.4
LINC00963-217ENST00000624009 MSRB2Q9Y3D2 182 aa12.54□□□□□ -0.4
LINC00963-217ENST00000624009 CSNK1G3Q9Y6M4 447 aa12.54□□□□□ -0.4
LINC00963-217ENST00000624009 MYLKQ15746 1914 aa12.54□□□□□ -0.4
LINC00963-217ENST00000624009 ZFC3H1O60293 1989 aaKnown RBP12.53□□□□□ -0.4
LINC00963-217ENST00000624009 TMEM8BA6NDV4 472 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 POM121BA6NF01 834 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 NEMP2A6NFY4 417 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 MUSKO15146 869 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 RAD51BO15315 384 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 CSF2P04141 144 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 CD48P09326 243 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 NME1P15531 152 aaKnown RBP12.53□□□□□ -0.4
LINC00963-217ENST00000624009 FOXC1Q12948 553 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 MMRN1Q13201 1228 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 ZNF211Q13398 564 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-217ENST00000624009 MESDQ14696 234 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 SPA17Q15506 151 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 ATP13A4Q4VNC1 1196 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 SLC9A4Q6AI14 798 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 DPPA4Q7L190 304 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 PTAR1Q7Z6K3 402 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-217ENST00000624009 TMTC1Q8IUR5 882 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 TP53INP2Q8IXH6 220 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 RHOT1Q8IXI2 618 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 RAVER1Q8IY67 606 aaKnown RBP12.53□□□□□ -0.4
LINC00963-217ENST00000624009 PQLC3Q8N755 202 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 BTN2A2Q8WVV5 523 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 KLK6Q92876 244 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 HDAC11Q96DB2 347 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 ZNF830Q96NB3 372 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-217ENST00000624009 RNF157Q96PX1 679 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 DUSP23Q9BVJ7 150 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 SCNM1Q9BWG6 230 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 POLR1EQ9GZS1 481 aaKnown RBP12.53□□□□□ -0.4
LINC00963-217ENST00000624009 BRD8Q9H0E9 1235 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 RBSNQ9H1K0 784 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 USP29Q9HBJ7 922 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 ITM2BQ9Y287 266 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 CA5BQ9Y2D0 317 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 PPIL1Q9Y3C6 166 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 ZFYVE26Q68DK2 2539 aa12.53□□□□□ -0.4
LINC00963-217ENST00000624009 C3orf70A6NLC5 250 aaPredicted RBP12.52□□□□□ -0.41
LINC00963-217ENST00000624009 H3BM21 787 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 PSMD11O00231 422 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 PSTPIP1O43586 416 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 MFSD11O43934 449 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 MMP20O60882 483 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 PIAS2O75928 621 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 KRT10P13645 584 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 C6P13671 934 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 DGKAP23743 735 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 CLDN2P57739 230 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 FZD2Q14332 565 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 LRRC14Q15048 493 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 MACC1Q6ZN28 852 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 SLCO6A1Q86UG4 719 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 ZSWIM9Q86XI8 627 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 CACTIN-AS1Q8N1I8 211 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 GALNT15Q8N3T1 639 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 SDR16C5Q8N3Y7 309 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 FAM181AQ8N9Y4 354 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 TP53I13Q8NBR0 393 aaPredicted RBP12.52□□□□□ -0.41
LINC00963-217ENST00000624009 NETO2Q8NC67 525 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 OR4C6Q8NH72 309 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 ATL2Q8NHH9 583 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 RAPGEF5Q92565 580 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 MCCC1Q96RQ3 725 aaPredicted RBP12.52□□□□□ -0.41
LINC00963-217ENST00000624009 FZD3Q9NPG1 666 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 SCUBE2Q9NQ36 999 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 NLGN3Q9NZ94 848 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 NCKIPSDQ9NZQ3 722 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 DNPEPQ9ULA0 475 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 PHTF1Q9UMS5 762 aa12.52□□□□□ -0.41
LINC00963-217ENST00000624009 LRRD1A4D1F6 860 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 BTNL10A8MVZ5 291 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 ENC1O14682 589 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 TPP1O14773 563 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 SCAMP1O15126 338 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 IPO7O95373 1038 aaKnown RBP12.51□□□□□ -0.41
LINC00963-217ENST00000624009 LDOC1O95751 146 aaPredicted RBP12.51□□□□□ -0.41
LINC00963-217ENST00000624009 HOXC4P09017 264 aaPredicted RBP12.51□□□□□ -0.41
LINC00963-217ENST00000624009 ATXN1LP0C7T5 689 aaKnown RBP12.51□□□□□ -0.41
LINC00963-217ENST00000624009 ALPPL2P10696 532 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 CA4P22748 312 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 ACP1P24666 158 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 IGFALSP35858 605 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 MAGEA1P43355 309 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 NR2C2P49116 596 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 LIG3P49916 1009 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 BLKP51451 505 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 THOP1P52888 689 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 RPL26P61254 145 aaKnown RBP12.51□□□□□ -0.41
LINC00963-217ENST00000624009 IL9RQ01113 521 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 PPIDQ08752 370 aaKnown RBP12.51□□□□□ -0.41
LINC00963-217ENST00000624009 RALGDSQ12967 914 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 BNIP3Q12983 259 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms