RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SEPT3Q9UH03 358 aa17.29■□□□□ 0.36
HMGN3-203ENST00000620514 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.29■□□□□ 0.363e-6■□□□□ 10.3
HMGN3-203ENST00000620514 ANKRD36A6QL64 1941 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 MYO1FO00160 1098 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 TRAFD1O14545 582 aaPredicted RBP17.28■□□□□ 0.36
HMGN3-203ENST00000620514 GCATO75600 419 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 IL4RP24394 825 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 HNRNPH3P31942 346 aaKnown RBP17.28■□□□□ 0.36
HMGN3-203ENST00000620514 CDH6P55285 790 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 YPEL5P62699 121 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 RALGDSQ12967 914 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 C1orf61Q13536 156 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 PTK2BQ14289 1009 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 KRT81Q14533 505 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 LRRC14Q15048 493 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 ATP13A4Q4VNC1 1196 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 MACC1Q6ZN28 852 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 PHACTR4Q8IZ21 702 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 PGBD5Q8N414 524 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 FAM181AQ8N9Y4 354 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 ZNF564Q8TBZ8 553 aaPredicted RBP17.28■□□□□ 0.36
HMGN3-203ENST00000620514 RFFLQ8WZ73 363 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 ZNF599Q96NL3 588 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 DUSP23Q9BVJ7 150 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 DKK4Q9UBT3 224 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 APOBEC3BQ9UH17 382 aaKnown RBP17.28■□□□□ 0.36
HMGN3-203ENST00000620514 CSNK1G3Q9Y6M4 447 aa17.28■□□□□ 0.36
HMGN3-203ENST00000620514 MYLKQ15746 1914 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 LZTS3O60299 673 aaPredicted RBP17.27■□□□□ 0.36
HMGN3-203ENST00000620514 MAFKO60675 156 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 GJC1P36383 396 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 RENBPP51606 427 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 ARSEP51690 589 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 ZNF235Q14590 738 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 INPP5AQ14642 412 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 SKOR2Q2VWA4 1001 aaPredicted RBP17.27■□□□□ 0.36
HMGN3-203ENST00000620514 PRRT3Q5FWE3 981 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 C19orf48Q6RUI8 117 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 PAF1Q8N7H5 531 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 PLA2G15Q8NCC3 412 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 LRRC61Q9BV99 259 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 CTTNBP2NLQ9P2B4 639 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 SPASTQ9UBP0 616 aa17.27■□□□□ 0.36
HMGN3-203ENST00000620514 ANKRD11Q6UB99 2663 aaPredicted RBP17.27■□□□□ 0.35
HMGN3-203ENST00000620514 ACACAQ13085 2346 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 A8MX80 341 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 TOR1BO14657 336 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 MT-CO3P00414 261 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 PCCBP05166 539 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 TPM3P06753 285 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 CELA2BP08218 269 aaPredicted RBP17.26■□□□□ 0.35
HMGN3-203ENST00000620514 GM2AP17900 193 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 CR2P20023 1033 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 ADKP55263 362 aaKnown RBP17.26■□□□□ 0.35
HMGN3-203ENST00000620514 TAS2R40P59535 323 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 MAXP61244 160 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 AP1S1P61966 158 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 E2F1Q01094 437 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 AGERQ15109 404 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 ASTE1Q2TB18 679 aaPredicted RBP17.26■□□□□ 0.35
HMGN3-203ENST00000620514 FAXCQ5TGI0 409 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 SPECC1LQ69YQ0 1117 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 ZCCHC8Q6NZY4 707 aaKnown RBP17.26■□□□□ 0.35
HMGN3-203ENST00000620514 LIPIQ6XZB0 460 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 DPPA4Q7L190 304 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 ATPAF2Q8N5M1 289 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 FAM71BQ8TC56 605 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 BTN2A2Q8WVV5 523 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 APOOQ9BUR5 198 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 CLPBQ9H078 707 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 NOD2Q9HC29 1040 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 CLCA2Q9UQC9 943 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 GPSM3Q9Y4H4 160 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 OR1A2Q9Y585 309 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 PCDHGC4Q9Y5F7 938 aa17.26■□□□□ 0.35
HMGN3-203ENST00000620514 MFSD11O43934 449 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 OPA1O60313 960 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 RECQL5O94762 991 aaPredicted RBP17.25■□□□□ 0.35
HMGN3-203ENST00000620514 PROSCO94903 275 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 TSHRP16473 764 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 SERPINB6P35237 376 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 PPARDQ03181 441 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 DPYSL3Q14195 570 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 NFATC4Q14934 902 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 TCEA2Q15560 299 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 SLC18A3Q16572 532 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 CDKN3Q16667 212 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 HADHQ16836 314 aaKnown RBP17.25■□□□□ 0.35
HMGN3-203ENST00000620514 ALG11Q2TAA5 492 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 KCTD16Q68DU8 428 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 GUSBP11Q6P575 273 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 ENPP7Q6UWV6 458 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 DCBLD1Q8N8Z6 715 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 OR8K1Q8NGG5 319 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 IFI44Q8TCB0 444 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 TSACCQ96A04 125 aaPredicted RBP17.25■□□□□ 0.35
HMGN3-203ENST00000620514 NXPE2Q96DL1 559 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 NUDCD1Q96RS6 583 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 DNAJC7Q99615 494 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 IL12RB2Q99665 862 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms