RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 EBF4Q9BQW3 602 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 GINM1Q9NU53 330 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 TIMM13Q9Y5L4 95 aaPredicted RBP3.1□□□□□ -1.91
NEB-220ENST00000618972 PCDH11YQ9BZA8 1340 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 KPNA6O60684 536 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 CCDC130P13994 396 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 UGT1A6P19224 532 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 MAPK1P28482 360 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 AKT1P31749 480 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 NUDT1P36639 197 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 BNIP2Q12982 314 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 HERC3Q15034 1050 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 ACOT1Q86TX2 421 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 TRPV3Q8NET8 790 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 METTL6Q8TCB7 284 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 TSPEARQ8WU66 669 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 OXCT2Q9BYC2 517 aaPredicted RBP3.1□□□□□ -1.91
NEB-220ENST00000618972 DNAJC5Q9H3Z4 198 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 PAK6Q9NQU5 681 aaPredicted RBP3.1□□□□□ -1.91
NEB-220ENST00000618972 USP6P35125 1406 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 NEMP1O14524 444 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 PRKCQQ04759 706 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 SKIV2LQ15477 1246 aaKnown RBP3.1□□□□□ -1.91
NEB-220ENST00000618972 CDC73Q6P1J9 531 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 BEND5Q7L4P6 421 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 SNX32Q86XE0 403 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 URGCPQ8TCY9 931 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 RFKQ969G6 155 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 ZUFSPQ96AP4 578 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 VANGL2Q9ULK5 521 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 MLH3Q9UHC1 1453 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 H3BUI4 141 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 DENRO43583 198 aaKnown RBP3.1□□□□□ -1.91
NEB-220ENST00000618972 STBD1O95210 358 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 MT-ND1P03886 318 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 ZNF24P17028 368 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 RPL14P50914 215 aaKnown RBP3.1□□□□□ -1.91
NEB-220ENST00000618972 RAB27AP51159 221 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 FAM214AQ32MH5 1076 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 TBRG1Q3YBR2 411 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 RABL3Q5HYI8 236 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 TAS1R3Q7RTX0 852 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 ZNF567Q8N184 647 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 NECTIN3Q9NQS3 549 aa3.1□□□□□ -1.91
NEB-220ENST00000618972 B8ZZF3 427 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 MYL12AP19105 171 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ITGA7Q13683 1181 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CIAPIN1Q6FI81 312 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 GPD1LQ8N335 351 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 BCL7BQ9BQE9 202 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 RNF39Q9H2S5 420 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 GPN2Q9H9Y4 310 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 NMRAL1Q9HBL8 299 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 MTF2Q9Y483 593 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 CTTNBP2Q8WZ74 1663 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ASLP04424 464 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CSN2P05814 226 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 HMBSP08397 361 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CDH4P55283 916 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 MRPS10P82664 201 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 HYIQ5T013 277 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 SNX29P2Q8IUI4 249 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CHPFQ8IZ52 775 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 PKP2Q99959 881 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 EBF2Q9HAK2 575 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 PCYOX1Q9UHG3 505 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 IGKV6D-41A0A0C4DH26 115 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 MLYCDO95822 493 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 LYNP07948 512 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 XRCC1P18887 633 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 KCNK10P57789 538 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 GRIK2Q13002 908 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 HMGN3Q15651 99 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 EGFLAMQ63HQ2 1017 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 BHLHB9Q6PI77 547 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 HIPK1Q86Z02 1210 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 SLC25A36Q96CQ1 311 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 SP140LQ9H930 580 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 ABCA1O95477 2261 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 PCF11O94913 1555 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 EIF1AYO14602 144 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 LCP1P13796 627 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 EPCAMP16422 314 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 EIF1AXP47813 144 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 AQP5P55064 265 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CDH18Q13634 790 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 OR10Q1Q8NGQ4 319 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 BTN2A2Q8WVV5 523 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 DDX1Q92499 740 aaKnown RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 ZNF597Q96LX8 424 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 C10orf90Q96M02 699 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 TNKS2Q9H2K2 1166 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 PRDM5Q9NQX1 630 aaPredicted RBP3.09□□□□□ -1.91
NEB-220ENST00000618972 TSPAN4O14817 238 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 PROSCO94903 275 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 PGK1P00558 417 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 FTH1P02794 183 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CAPNS1P04632 268 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 CYP2C8P10632 490 aa3.09□□□□□ -1.91
NEB-220ENST00000618972 FPGSQ05932 587 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms