RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 PEBP4Q96S96 227 aa22.09■■□□□ 1.13
POLR2J3-220ENST00000613744 CNPY3Q9BT09 278 aa22.09■■□□□ 1.13
POLR2J3-220ENST00000613744 CXorf21Q9HAI6 301 aa22.09■■□□□ 1.13
POLR2J3-220ENST00000613744 DYTNA2CJ06 578 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 H3BMQ9 156 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 TFPTP0C1Z6 253 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 GP5P40197 560 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 SEPT6Q14141 434 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 PTK2BQ14289 1009 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 RGS21Q2M5E4 152 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 NANOGP8Q6NSW7 305 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 CYP4V2Q6ZWL3 525 aaPredicted RBP22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 SPRED2Q7Z698 418 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 CMTR2Q8IYT2 770 aaKnown RBP22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 EMC1Q8N766 993 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 USP13Q92995 863 aaPredicted RBP22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 COG8Q96MW5 612 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 AGAP3Q96P47 875 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 CGREF1Q99674 301 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 TUBA1CQ9BQE3 449 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 DCUN1D5Q9BTE7 237 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 NPLQ9BXD5 320 aaPredicted RBP22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 C8orf4Q9NR00 106 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 ATAD3AQ9NVI7 634 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 SEPT3Q9UH03 358 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 TMEM98Q9Y2Y6 226 aa22.08■■□□□ 1.13
POLR2J3-220ENST00000613744 TCRBV3S1A0A5B6 114 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 CNOT3O75175 753 aaKnown RBP22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 ATE1O95260 518 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 MPOP05164 745 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 APOA4P06727 396 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 GALTP07902 379 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 PGAM1P18669 254 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 UGT1A6P19224 532 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 UGT1A1P22309 533 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 UGT1A4P22310 534 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 UGT1A3P35503 534 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 UGT1A5P35504 534 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 PBX2P40425 430 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 BRCC3P46736 316 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 LILRA4P59901 499 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 GRSF1Q12849 480 aaKnown RBP eCLIP22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 GRIN3AQ8TCU5 1115 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 CPNE1Q99829 537 aa22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 DUS2Q9NX74 493 aaKnown RBP22.08■■□□□ 1.12
POLR2J3-220ENST00000613744 CDH23Q9H251 3354 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 PAPSS1O43252 624 aaPredicted RBP22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 ARHGEF15O94989 841 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 C7P10643 843 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 BMP2P12643 396 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 P4HA1P13674 534 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 RPL14P50914 215 aaKnown RBP22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 CTBSQ01459 385 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 BOLA3Q53S33 107 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 MYO1HQ8N1T3 1032 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 LRRC52Q8N7C0 313 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 FAM47BQ8NA70 645 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 RDH11Q8TC12 318 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 LRTOMTQ8WZ04 291 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 PBXIP1Q96AQ6 731 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 DRC3Q9H069 523 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 TXNDC16Q9P2K2 825 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 DOLKQ9UPQ8 538 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 ERGIC3Q9Y282 383 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 G3V2L1 256 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 AKAP10O43572 662 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 GPD1P21695 349 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 S100A1P23297 94 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 GABRB3P28472 473 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 RPL9P32969 192 aaKnown RBP22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 ALDH7A1P49419 539 aaKnown RBP22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 NME5P56597 212 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 ORC1Q13415 861 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 STILQ15468 1287 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 TTC33Q6PID6 262 aaPredicted RBP22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 CD300LGQ6UXG3 332 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 EFHD2Q96C19 240 aaPredicted RBP22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 ZNF560Q96MR9 790 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 VRTNQ9H8Y1 702 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 SARDHQ9UL12 918 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 HEY1Q9Y5J3 304 aa22.07■■□□□ 1.12
POLR2J3-220ENST00000613744 PRPSAP2O60256 369 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 METTL18O95568 372 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 TAF6P49848 677 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 CDH15P55291 814 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 PRKAA1Q13131 559 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 MAP7D1Q3KQU3 841 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 INTS11Q5TA45 600 aaKnown RBP22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 ZBTB49Q6ZSB9 765 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 FRA10AC1Q70Z53 315 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 PQLC3Q8N755 202 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 BCL7CQ8WUZ0 217 aaPredicted RBP22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 C1orf50Q9BV19 199 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 YTHDF1Q9BYJ9 559 aaKnown RBP22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 TRPV5Q9NQA5 729 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 EIF2B3Q9NR50 452 aaKnown RBP22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 MTMR10Q9NXD2 777 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 CYTH4Q9UIA0 394 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 CDC14AQ9UNH5 594 aa22.06■■□□□ 1.12
POLR2J3-220ENST00000613744 CDYLQ9Y232 598 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms