RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 L1CAMP32004 1257 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 LSSP48449 732 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 CCNHP51946 323 aaPredicted RBP13.89□□□□□ -0.19
IRF3-225ENST00000600022 EIF2B5Q13144 721 aaKnown RBP13.89□□□□□ -0.19
IRF3-225ENST00000600022 C1orf61Q13536 156 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 LY6DQ14210 128 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 MESDQ14696 234 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 ISXQ2M1V0 245 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 SLC25A52Q3SY17 297 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 CARD16Q5EG05 197 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 LRRC73Q5JTD7 316 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 BRMS1LQ5PSV4 323 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 PERM1Q5SV97 790 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 CCDC70Q6NSX1 233 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 DCUN1D2Q6PH85 259 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 SETD3Q86TU7 594 aaPredicted RBP13.89□□□□□ -0.19
IRF3-225ENST00000600022 CTAGE6Q86UF2 777 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 FAM131BQ86XD5 332 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 CTAGE4Q8IX94 777 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 FAM181AQ8N9Y4 354 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 ZNF248Q8NDW4 579 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 MAPK15Q8TD08 544 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 FNIP1Q8TF40 1166 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 PGAP3Q96FM1 320 aaPredicted RBP13.89□□□□□ -0.19
IRF3-225ENST00000600022 PRR11Q96HE9 360 aaPredicted RBP13.89□□□□□ -0.19
IRF3-225ENST00000600022 PBKQ96KB5 322 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 CFAP57Q96MR6 1250 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 ZNF578Q96N58 590 aaPredicted RBP13.89□□□□□ -0.19
IRF3-225ENST00000600022 OSBPL9Q96SU4 736 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 CARD6Q9BX69 1037 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 TM6SF2Q9BZW4 377 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 ABCG4Q9H172 646 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 POLR1BQ9H9Y6 1135 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 ANAPC7Q9UJX3 599 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 SATB2Q9UPW6 733 aa13.89□□□□□ -0.19
IRF3-225ENST00000600022 COL27A1Q8IZC6 1860 aaPredicted RBP13.89□□□□□ -0.19
IRF3-225ENST00000600022 TMEM110-MUSTN1A8MSY1 372 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 EFCAB8A8MWE9 144 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 FAM72CH0Y354 149 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 CES2O00748 559 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 GJB6O95452 261 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 NME1P15531 152 aaKnown RBP13.88□□□□□ -0.19
IRF3-225ENST00000600022 MAN1A1P33908 653 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 SLC1A1P43005 524 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 SERPINH1P50454 418 aaKnown RBP13.88□□□□□ -0.19
IRF3-225ENST00000600022 NEK3P51956 506 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 PCBP4P57723 403 aaKnown RBP13.88□□□□□ -0.19
IRF3-225ENST00000600022 RPS21P63220 83 aaKnown RBP13.88□□□□□ -0.19
IRF3-225ENST00000600022 PDE1CQ14123 709 aaPredicted RBP13.88□□□□□ -0.19
IRF3-225ENST00000600022 C3orf38Q5JPI3 329 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 FAM102AQ5T9C2 384 aaPredicted RBP13.88□□□□□ -0.19
IRF3-225ENST00000600022 FAM72AQ5TYM5 149 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 FAM72DQ6L9T8 149 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 LRRC31Q6UY01 552 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 EFL1Q7Z2Z2 1120 aaKnown RBP13.88□□□□□ -0.19
IRF3-225ENST00000600022 BNIPLQ7Z465 357 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 FAM72BQ86X60 149 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 EMC1Q8N766 993 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 LMX1AQ8TE12 382 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 UBXN4Q92575 508 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 FEM1CQ96JP0 617 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 CCDC114Q96M63 670 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 DEPDC7Q96QD5 511 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 HEPHQ9BQS7 1158 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 C1QTNF2Q9BXJ5 285 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 ZDHHC6Q9H6R6 413 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 ATP13A1Q9HD20 1204 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 TMEM59LQ9UK28 342 aa13.88□□□□□ -0.19
IRF3-225ENST00000600022 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.88□□□□□ -0.19
IRF3-225ENST00000600022 ILVBLA1L0T0 632 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 TMEM191CA6NGB0 347 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 SIGLEC16A6NMB1 481 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 DXOO77932 396 aaKnown RBP13.87□□□□□ -0.19
IRF3-225ENST00000600022 CELA2BP08218 269 aaPredicted RBP13.87□□□□□ -0.19
IRF3-225ENST00000600022 JUNDP17535 347 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 ITGB7P26010 798 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 RECQLP46063 649 aaPredicted RBP13.87□□□□□ -0.19
IRF3-225ENST00000600022 CLCN6P51797 869 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 HNRNPKP61978 463 aaKnown RBP eCLIP13.87□□□□□ -0.19
IRF3-225ENST00000600022 GNA12Q03113 381 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 TCEA2Q15560 299 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 KYAT3Q6YP21 454 aaKnown RBP13.87□□□□□ -0.19
IRF3-225ENST00000600022 ARCQ7LC44 396 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 NT5DC3Q86UY8 548 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 LSM14AQ8ND56 463 aaKnown RBP13.87□□□□□ -0.19
IRF3-225ENST00000600022 IFT43Q96FT9 208 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 CAPZA3Q96KX2 299 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 MCEEQ96PE7 176 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 NAP1L3Q99457 506 aaPredicted RBP13.87□□□□□ -0.19
IRF3-225ENST00000600022 TLR10Q9BXR5 811 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 MBNL1Q9NR56 388 aaKnown RBP13.87□□□□□ -0.19
IRF3-225ENST00000600022 METTL5Q9NRN9 209 aaKnown RBP13.87□□□□□ -0.19
IRF3-225ENST00000600022 IP6K2Q9UHH9 426 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 ENTPD2Q9Y5L3 495 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 KIF26BQ2KJY2 2108 aa13.87□□□□□ -0.19
IRF3-225ENST00000600022 RP1P56715 2156 aa13.86□□□□□ -0.19
IRF3-225ENST00000600022 CCDC66A2RUB6 948 aa13.86□□□□□ -0.19
IRF3-225ENST00000600022 NEMP2A6NFY4 417 aa13.86□□□□□ -0.19
IRF3-225ENST00000600022 C16orf96A6NNT2 1141 aa13.86□□□□□ -0.19
IRF3-225ENST00000600022 DYNC1I1O14576 645 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms