RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 TRAF2Q12933 501 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 SGCGQ13326 291 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 CAMK2BQ13554 666 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 PDE1CQ14123 709 aaPredicted RBP12.24□□□□□ -0.45
LIG1-217ENST00000599165 GRM3Q14832 879 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 AGERQ15109 404 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 PTPRRQ15256 657 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 IRF4Q15306 451 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 INAVAQ3KP66 663 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 ANKRD20A8PQ5CZ79 823 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 BRAT1Q6PJG6 821 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 PELI3Q8N2H9 469 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 TEX26Q8N6G2 289 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 SLC35G2Q8TBE7 412 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 FAM174AQ8TBP5 190 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 LRRN4Q8WUT4 740 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 IFT43Q96FT9 208 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 ZNF670Q9BS34 389 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 RBSNQ9H1K0 784 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 SEPT3Q9UH03 358 aa12.24□□□□□ -0.45
LIG1-217ENST00000599165 CFAP47Q6ZTR5 3102 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 FAM149AA5PLN7 773 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 TMEM110-MUSTN1A8MSY1 372 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 FPGTO14772 594 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 AKR1B10O60218 316 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 NEBLO76041 1014 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 MYF5P13349 255 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 SERPINA4P29622 427 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 LIG3P49916 1009 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 SCNN1BP51168 640 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 SUOXP51687 545 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 AP1S1P61966 158 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 GBE1Q04446 702 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 ELP6Q0PNE2 266 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 ZNF211Q13398 564 aaPredicted RBP12.23□□□□□ -0.45
LIG1-217ENST00000599165 KRT81Q14533 505 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 TCEAL1Q15170 157 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 FAM182AQ5T1J6 154 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 PARGQ86W56 976 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 GAS2L3Q86XJ1 694 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 DCP2Q8IU60 420 aaKnown RBP12.23□□□□□ -0.45
LIG1-217ENST00000599165 RBFAQ8N0V3 343 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 ZNF548Q8NEK5 533 aaPredicted RBP12.23□□□□□ -0.45
LIG1-217ENST00000599165 OR4C6Q8NH72 309 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 CXorf40AQ8TE69 158 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 MAML1Q92585 1016 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 SMIM14Q96QK8 99 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 NUDCD1Q96RS6 583 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 ATP13A3Q9H7F0 1226 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 NOD2Q9HC29 1040 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 DNAJC28Q9NX36 388 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 ZMIZ1Q9ULJ6 1067 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 TFR2Q9UP52 801 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 PCDHGC4Q9Y5F7 938 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 PCDHGA1Q9Y5H4 931 aa12.23□□□□□ -0.45
LIG1-217ENST00000599165 ARHGEF17Q96PE2 2063 aaPredicted RBP12.22□□□□□ -0.45
LIG1-217ENST00000599165 CHD6Q8TD26 2715 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 AKR1B15C9JRZ8 316 aaPredicted RBP12.22□□□□□ -0.45
LIG1-217ENST00000599165 FFAR2O15552 330 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 RFPL3O75679 317 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 LHCGRP22888 699 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 KDELR1P24390 212 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 GARSP41250 739 aaKnown RBP12.22□□□□□ -0.45
LIG1-217ENST00000599165 SSR1P43307 286 aaKnown RBP12.22□□□□□ -0.45
LIG1-217ENST00000599165 BCL2L1Q07817 233 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 MESDQ14696 234 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 PDK2Q15119 407 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 HADHQ16836 314 aaKnown RBP12.22□□□□□ -0.45
LIG1-217ENST00000599165 CCDC157Q569K6 752 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 ALG1LQ6GMV1 187 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 LIPIQ6XZB0 460 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 DPPA4Q7L190 304 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 CBARPQ8N350 705 aaPredicted RBP12.22□□□□□ -0.45
LIG1-217ENST00000599165 ATPAF2Q8N5M1 289 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 PLD5Q8N7P1 536 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 PLA2G15Q8NCC3 412 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 RFFLQ8WZ73 363 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 DEF6Q9H4E7 631 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 B4GALT6Q9UBX8 382 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 HYOU1Q9Y4L1 999 aa12.22□□□□□ -0.45
LIG1-217ENST00000599165 ZFYVE26Q68DK2 2539 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 A0A0U1RQS6 177 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 CFAP69A5D8W1 941 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 A8MX80 341 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 K7ESM1 405 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 SCAMP1O15126 338 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 FZD6O60353 706 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 SOCS5O75159 536 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 GCATO75600 419 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 LCA5LO95447 670 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 CELA2BP08218 269 aaPredicted RBP12.21□□□□□ -0.45
LIG1-217ENST00000599165 CKMT2P17540 419 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 ACP1P24666 158 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 SERPINB6P35237 376 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 HSPA9P38646 679 aaKnown RBP12.21□□□□□ -0.45
LIG1-217ENST00000599165 MMP13P45452 471 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 RENBPP51606 427 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 YPEL5P62699 121 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 ZNF235Q14590 738 aa12.21□□□□□ -0.45
LIG1-217ENST00000599165 MACC1Q6ZN28 852 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms