RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 PKD1L2Q7Z442 2459 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 H3BM21 787 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 AQP9O43315 295 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 CELA2BP08218 269 aaPredicted RBP13.14□□□□□ -0.31
LIG1-212ENST00000596549 CKMT1AP12532 417 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 JUNDP17535 347 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 XPAP23025 273 aaPredicted RBP13.14□□□□□ -0.31
LIG1-212ENST00000596549 GJC1P36383 396 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 LIG3P49916 1009 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 CDH6P55285 790 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 TAS2R40P59535 323 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 AP1S1P61966 158 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 YPEL5P62699 121 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 DAB2P98082 770 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 BCL2L1Q07817 233 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 DPYSL3Q14195 570 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 SLC18A3Q16572 532 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 SKOR2Q2VWA4 1001 aaPredicted RBP13.14□□□□□ -0.31
LIG1-212ENST00000596549 ATP13A4Q4VNC1 1196 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 CFAP58Q5T655 872 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 KCTD16Q68DU8 428 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 SPECC1LQ69YQ0 1117 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 PHACTR4Q8IZ21 702 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 ATPAF2Q8N5M1 289 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 C1QTNF7Q9BXJ2 289 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 ABHD10Q9NUJ1 306 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 RCOR3Q9P2K3 495 aaPredicted RBP13.14□□□□□ -0.31
LIG1-212ENST00000596549 SEPT3Q9UH03 358 aa13.14□□□□□ -0.31
LIG1-212ENST00000596549 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.14□□□□□ -0.312e-7■■□□□ 13.1
LIG1-212ENST00000596549 ZFC3H1O60293 1989 aaKnown RBP13.13□□□□□ -0.31
LIG1-212ENST00000596549 MYO1FO00160 1098 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 HTRA2O43464 458 aaPredicted RBP13.13□□□□□ -0.31
LIG1-212ENST00000596549 MFAP3LO75121 409 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 GCATO75600 419 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 PROSCO94903 275 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 MAP3K6O95382 1288 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 PCCBP05166 539 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 ALPPL2P10696 532 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 CDK4P11802 303 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 SERPINB6P35237 376 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 HNF1BP35680 557 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 SCNN1BP51168 640 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 THOP1P52888 689 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 MAXP61244 160 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 CYP4F3Q08477 520 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 NSUN2Q08J23 767 aaKnown RBP eCLIP13.13□□□□□ -0.31
LIG1-212ENST00000596549 TRAF2Q12933 501 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 TARDBPQ13148 414 aaKnown RBP eCLIP13.13□□□□□ -0.311e-7■■■■□ 25.2
LIG1-212ENST00000596549 TRIM14Q14142 442 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 KRT81Q14533 505 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 ZNF235Q14590 738 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 LRRC14Q15048 493 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 DEFB133Q30KQ1 61 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 ZCCHC8Q6NZY4 707 aaKnown RBP13.13□□□□□ -0.31
LIG1-212ENST00000596549 ERAP2Q6P179 960 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 LIPIQ6XZB0 460 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 DPPA4Q7L190 304 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 VSTM4Q8IW00 320 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 PELI3Q8N2H9 469 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 PDCD7Q8N8D1 485 aaKnown RBP13.13□□□□□ -0.31
LIG1-212ENST00000596549 FAM181AQ8N9Y4 354 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 PLA2G15Q8NCC3 412 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 RNF214Q8ND24 703 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 LMX1AQ8TE12 382 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 SPOCK2Q92563 424 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 NUDCD1Q96RS6 583 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 CHP1Q99653 195 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 CLPBQ9H078 707 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 TSPY26PQ9H489 355 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 RAXQ9Y2V3 346 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 OR1A2Q9Y585 309 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 CSNK1G3Q9Y6M4 447 aa13.13□□□□□ -0.31
LIG1-212ENST00000596549 GOLGA4Q13439 2230 aaKnown RBP13.13□□□□□ -0.31
LIG1-212ENST00000596549 SSU72P8A0A1W2PR75 194 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 TOR1BO14657 336 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 SOCS5O75159 536 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 TPM3P06753 285 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 JUPP14923 745 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 LHCGRP22888 699 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 RENBPP51606 427 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 C1orf61Q13536 156 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 PTK2BQ14289 1009 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 NFATC4Q14934 902 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 PAFAH1B3Q15102 231 aaKnown RBP13.12□□□□□ -0.31
LIG1-212ENST00000596549 ALG11Q2TAA5 492 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 GUSBP11Q6P575 273 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 DCBLD1Q8N8Z6 715 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 PCDH19Q8TAB3 1148 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 CTNNBL1Q8WYA6 563 aaPredicted RBP13.12□□□□□ -0.31
LIG1-212ENST00000596549 FUBP1Q96AE4 644 aaKnown RBP13.12□□□□□ -0.31
LIG1-212ENST00000596549 FAF2Q96CS3 445 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 PDXPQ96GD0 296 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 TBATAQ96M53 351 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 ZNF670Q9BS34 389 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 DUSP23Q9BVJ7 150 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 SPTLC3Q9NUV7 552 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 CTTNBP2NLQ9P2B4 639 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 UVRAGQ9P2Y5 699 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 B4GALT6Q9UBX8 382 aa13.12□□□□□ -0.31
LIG1-212ENST00000596549 GPSM3Q9Y4H4 160 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms