RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 CALN1Q9BXU9 219 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 FTSJ1Q9UET6 329 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 AMACRQ9UHK6 382 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 PCDHGA1Q9Y5H4 931 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 USP24Q9UPU5 2620 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 KMT2BQ9UMN6 2715 aaPredicted RBP13.14□□□□□ -0.31
USE1-207ENST00000596136 MATN3O15232 486 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 PIAS2O75928 621 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 LDOC1O95751 146 aaPredicted RBP13.14□□□□□ -0.31
USE1-207ENST00000596136 CSF2P04141 144 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 C1SP09871 688 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 GIMD1P0DJR0 217 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 C6P13671 934 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 SPINK2P20155 84 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 IGFALSP35858 605 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 MAGEA1P43355 309 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 MMP13P45452 471 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 LIG3P49916 1009 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 SLC10A2Q12908 348 aaPredicted RBP13.14□□□□□ -0.31
USE1-207ENST00000596136 RALGDSQ12967 914 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 IFI16Q16666 785 aaKnown RBP13.14□□□□□ -0.31
USE1-207ENST00000596136 TPRG1LQ5T0D9 272 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 PTAR1Q7Z6K3 402 aaPredicted RBP13.14□□□□□ -0.31
USE1-207ENST00000596136 CBARPQ8N350 705 aaPredicted RBP13.14□□□□□ -0.31
USE1-207ENST00000596136 EID2Q8N6I1 236 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 PNPLA1Q8N8W4 532 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 NSMCE1Q8WV22 266 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 WRAP53Q9BUR4 548 aaKnown RBP13.14□□□□□ -0.31
USE1-207ENST00000596136 NOD2Q9HC29 1040 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 MBNL1Q9NR56 388 aaKnown RBP13.14□□□□□ -0.31
USE1-207ENST00000596136 KLK13Q9UKR3 277 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 PPIL1Q9Y3C6 166 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 IGF2RP11717 2491 aa13.14□□□□□ -0.31
USE1-207ENST00000596136 TMEM110-MUSTN1A8MSY1 372 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 ENC1O14682 589 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 CDK4P11802 303 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 NME1P15531 152 aaKnown RBP13.13□□□□□ -0.31
USE1-207ENST00000596136 MX2P20592 715 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 CES1P23141 567 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 GJC1P36383 396 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 PEX5P50542 639 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 HNRNPKP61978 463 aaKnown RBP eCLIP13.13□□□□□ -0.31
USE1-207ENST00000596136 GBE1Q04446 702 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 ZNF211Q13398 564 aaPredicted RBP13.13□□□□□ -0.31
USE1-207ENST00000596136 LRRC14Q15048 493 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 WSCD2Q2TBF2 565 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 PROX2Q3B8N5 592 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 CFAP58Q5T655 872 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 SLC9A4Q6AI14 798 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 TIGD7Q6NT04 549 aaPredicted RBP13.13□□□□□ -0.31
USE1-207ENST00000596136 LIPIQ6XZB0 460 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 DPPA4Q7L190 304 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 TMPRSS7Q7RTY8 843 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 PARGQ86W56 976 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 PLD5Q8N7P1 536 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 OR4C6Q8NH72 309 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 HDAC11Q96DB2 347 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 CNDP2Q96KP4 475 aaKnown RBP13.13□□□□□ -0.31
USE1-207ENST00000596136 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 UCKL1Q9NWZ5 548 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 DTLQ9NZJ0 730 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 KLF15Q9UIH9 416 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 PCDHGC4Q9Y5F7 938 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 CSNK1G3Q9Y6M4 447 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 CACNA1BQ00975 2339 aa13.13□□□□□ -0.31
USE1-207ENST00000596136 WDFY3Q8IZQ1 3526 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 A0A0A6YYK5 440 aaPredicted RBP13.12□□□□□ -0.31
USE1-207ENST00000596136 TTC24A2A3L6 582 aaPredicted RBP13.12□□□□□ -0.31
USE1-207ENST00000596136 TRIM38O00635 465 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 SCAMP1O15126 338 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 FZD6O60353 706 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 SDC3O75056 442 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 PROS1P07225 676 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 CKMT2P17540 419 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 GM2AP17900 193 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 ACADVLP49748 655 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 TRAF2Q12933 501 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 EIF2B5Q13144 721 aaKnown RBP13.12□□□□□ -0.31
USE1-207ENST00000596136 PDE1CQ14123 709 aaPredicted RBP13.12□□□□□ -0.31
USE1-207ENST00000596136 PTK2BQ14289 1009 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 IRF4Q15306 451 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 SMAD1Q15797 465 aaKnown RBP13.12□□□□□ -0.31
USE1-207ENST00000596136 TAZQ16635 292 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 CCNI2Q6ZMN8 369 aaPredicted RBP13.12□□□□□ -0.31
USE1-207ENST00000596136 RHOT1Q8IXI2 618 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 TBATAQ96M53 351 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 NT5MQ9NPB1 228 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 DDX56Q9NY93 547 aaKnown RBP13.12□□□□□ -0.31
USE1-207ENST00000596136 PHTF1Q9UMS5 762 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 COQ6Q9Y2Z9 468 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 PCDHA13Q9Y5I0 950 aa13.12□□□□□ -0.31
USE1-207ENST00000596136 DMXL2Q8TDJ6 3036 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 FREM2Q5SZK8 3169 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 LRRD1A4D1F6 860 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 NEMP2A6NFY4 417 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 SIGLEC6O43699 453 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 PGLSO95336 258 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 CAPNS1P04632 268 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 PRKCGP05129 697 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 CCNB1P14635 433 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms