RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ZSCAN30Q86W11 494 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 GATAD2AQ86YP4 633 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 TP53I13Q8NBR0 393 aaPredicted RBP11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 SKA1Q96BD8 255 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 CENPTQ96BT3 561 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 KLHDC7BQ96G42 594 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 OLFM3Q96PB7 478 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 LGMNQ99538 433 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 DESI2Q9BSY9 194 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 ERVMER34-1Q9H9K5 563 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 LUC7LQ9NQ29 371 aaKnown RBP11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 SCUBE2Q9NQ36 999 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 DDX56Q9NY93 547 aaKnown RBP11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 ATP8A1Q9Y2Q0 1164 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 COQ6Q9Y2Z9 468 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 PCDHGC4Q9Y5F7 938 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 HEY1Q9Y5J3 304 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 HS3ST3A1Q9Y663 406 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 BPTFQ12830 3046 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 FREM2Q5SZK8 3169 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 KNTC1P50748 2209 aa11.07□□□□□ -0.64
SHKBP1-206ENST00000595523 RP1P56715 2156 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 A6NNZ2 444 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 APOL1O14791 398 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 FLRT2O43155 660 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 DFNA5O60443 496 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 SOCS5O75159 536 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 TM7SF2O76062 418 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 HLA-DQB2P05538 268 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 KRT10P13645 584 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 C6P13671 934 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 CCNB1P14635 433 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 PECAM1P16284 738 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 GM2AP17900 193 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 MX2P20592 715 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 EPHA8P29322 1005 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 PMLP29590 882 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 RXRGP48443 463 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 DYNLT1P63172 113 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 DSC2Q02487 901 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 PPIDQ08752 370 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 BNIP3Q12983 259 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 ZBTB17Q13105 803 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 SGCGQ13326 291 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 PTPRRQ15256 657 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 LLGL1Q15334 1064 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 RALGPS1Q5JS13 557 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 TIGD7Q6NT04 549 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 SPOCD1Q6ZMY3 1216 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 Q6ZSR6 202 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 DPPA4Q7L190 304 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 DAAM2Q86T65 1068 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 RFX6Q8HWS3 928 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 CCDC13Q8IYE1 715 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 KATNAL2Q8IYT4 538 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 CNTD1Q8N815 330 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 LRRC57Q8N9N7 239 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 DENND6BQ8NEG7 585 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 ARRDC2Q8TBH0 407 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 CXorf40AQ8TE69 158 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 SAP25Q8TEE9 199 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 SETD7Q8WTS6 366 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 NSMCE1Q8WV22 266 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 SEMA3CQ99985 751 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 HERPUD2Q9BSE4 406 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 SLC32A1Q9H598 525 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 MBNL1Q9NR56 388 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 SAE1Q9UBE0 346 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 TRIM10Q9UDY6 481 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 WASF3Q9UPY6 502 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 ZZEF1O43149 2961 aa11.06□□□□□ -0.64
SHKBP1-206ENST00000595523 ANKRD11Q6UB99 2663 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 hCG_1818297A0A087WSY0 165 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 GRID2IPA4D2P6 1211 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 KCNK1O00180 336 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 FZD6O60353 706 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 IPO7O95373 1038 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 TOP3BO95985 862 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 PDHA1P08559 390 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 XPAP23025 273 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 CTNNA1P35221 906 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 LIG3P49916 1009 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 PFN3P60673 137 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 IFI35P80217 286 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 SIM1P81133 766 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 NIPAL4Q0D2K0 466 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 FZD2Q14332 565 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 AGERQ15109 404 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 IRF4Q15306 451 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 TRIP6Q15654 476 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 WSCD2Q2TBF2 565 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 CFAP58Q5T655 872 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 ERAP2Q6P179 960 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 LIPIQ6XZB0 460 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 B4GALNT4Q76KP1 1039 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 PTAR1Q7Z6K3 402 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 GLRX5Q86SX6 157 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 BBS5Q8N3I7 341 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 CCNYQ8ND76 341 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms