RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CAPN7Q9Y6W3 813 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 GPR179Q6PRD1 2367 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 CCNB1P14635 433 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 ITPKAP23677 461 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 DPP6P42658 865 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 ATP1A2P50993 1020 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 NEK3P51956 506 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 WDR45BQ5MNZ6 344 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 DCAF12L1Q5VU92 463 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 FBXW10Q5XX13 1052 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 FBXL19Q6PCT2 694 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 ALYREFQ86V81 257 aaKnown RBP19.8■□□□□ 0.76
LSM4-203ENST00000593829 PGBD5Q8N414 524 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 DCLK2Q8N568 766 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 PIGKQ92643 395 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 CCT8L2Q96SF2 557 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 MGME1Q9BQP7 344 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 TACO1Q9BSH4 297 aaKnown RBP19.8■□□□□ 0.76
LSM4-203ENST00000593829 HAUS2Q9NVX0 235 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 TBC1D3DA0A087WVF3 549 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 TBC1D3IA0A087WXS9 549 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 TBC1D3EA0A087X179 549 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 TBC1D3KA0A087X1G2 549 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 TBC1D3FA6NER0 549 aaPredicted RBP19.8■□□□□ 0.76
LSM4-203ENST00000593829 C16orf96A6NNT2 1141 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 TBC1D3LB9A6J9 549 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 RAD51CO43502 376 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 LRP3O75074 770 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 TBC1D3HP0C7X1 549 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 PECAM1P16284 738 aaPredicted RBP19.8■□□□□ 0.76
LSM4-203ENST00000593829 MPLP40238 635 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 AP1S1P61966 158 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 AP1B1Q10567 949 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 TBC1D3GQ6DHY5 549 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 TBC1D3CQ6IPX1 549 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 PARS2Q7L3T8 475 aaKnown RBP19.8■□□□□ 0.76
LSM4-203ENST00000593829 SYT12Q8IV01 421 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 RGL4Q8IZJ4 473 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 TBC1D3Q8IZP1 549 aaPredicted RBP19.8■□□□□ 0.76
LSM4-203ENST00000593829 ZNF641Q96N77 438 aaPredicted RBP19.8■□□□□ 0.76
LSM4-203ENST00000593829 ATP13A3Q9H7F0 1226 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 NT5MQ9NPB1 228 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 RBM22Q9NW64 420 aaKnown RBP eCLIP19.8■□□□□ 0.76
LSM4-203ENST00000593829 AMACRQ9UHK6 382 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.8■□□□□ 0.76
LSM4-203ENST00000593829 FRYLO94915 3013 aa19.8■□□□□ 0.76
LSM4-203ENST00000593829 GOLGA6L10A6NI86 522 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 NEBLO76041 1014 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 PIGNO95427 931 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 ADRB3P13945 408 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 TAS2R38P59533 333 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 GUCY1A3Q02108 690 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 ZNF211Q13398 564 aaPredicted RBP19.79■□□□□ 0.76
LSM4-203ENST00000593829 RPS6KA1Q15418 735 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 AGBL2Q5U5Z8 902 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 KIAA0895LQ68EN5 471 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 HCAR2Q8TDS4 363 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 NUDCD1Q96RS6 583 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 SUV39H2Q9H5I1 410 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 DKK3Q9UBP4 350 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 PILRBQ9UKJ0 227 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 PLAAQ9Y263 795 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 NFS1Q9Y697 457 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 SDK1Q7Z5N4 2213 aa19.79■□□□□ 0.76
LSM4-203ENST00000593829 SHROOM3Q8TF72 1996 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 CCDC188H7C350 402 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 TJP3O95049 919 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 CR2P20023 1033 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 SERPINA4P29622 427 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 ECHS1P30084 290 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 HOXD12P35452 270 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 ACTN3Q08043 901 aaPredicted RBP19.78■□□□□ 0.76
LSM4-203ENST00000593829 SPEM2Q0P670 501 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 RALGPS1Q5JS13 557 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 AADACL2Q6P093 401 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 DNASE2BQ8WZ79 361 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 SNX19Q92543 992 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 RAB7BQ96AH8 199 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 BIRC7Q96CA5 298 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 HAUS1Q96CS2 278 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 ACTR5Q9H9F9 607 aaPredicted RBP19.78■□□□□ 0.76
LSM4-203ENST00000593829 PREBQ9HCU5 417 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 SCUBE2Q9NQ36 999 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 NUMA1Q14980 2115 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 CEP192Q8TEP8 1941 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.78■□□□□ 0.76
LSM4-203ENST00000593829 ESYT3A0FGR9 886 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 APOC4-APOC2K7ER74 178 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 KCNK1O00180 336 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 GJB3O75712 270 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 JCHAINP01591 159 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 APOC2P02655 101 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 MAOBP27338 520 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 CCR5P51681 352 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 MAXP61244 160 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 BCL2L1Q07817 233 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 ITKQ08881 620 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 PLA2G2CQ5R387 149 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 CAMK1DQ8IU85 385 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 TFB1MQ8WVM0 346 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms