RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 SLCO2A1Q92959 643 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 FEM1CQ96JP0 617 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 APOL2Q9BQE5 337 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 TUBB2BQ9BVA1 445 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 FICDQ9BVA6 458 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 GPR174Q9BXC1 333 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 C6orf106Q9H6K1 298 aaPredicted RBP10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 SGK2Q9HBY8 427 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 PCDH12Q9NPG4 1184 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 RAB6BQ9NRW1 208 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 VPS45Q9NRW7 570 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 FEZ2Q9UHY8 353 aaPredicted RBP10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 AAR2Q9Y312 384 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 PPIL1Q9Y3C6 166 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 ARIH1Q9Y4X5 557 aaPredicted RBP10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 DOCK9Q9BZ29 2069 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 FANCMQ8IYD8 2048 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 A0A0J9YYE9 177 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 A0A1W2PQ67 120 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 TCRBV7S3A2A0A539 114 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 PRR23AA6NEV1 266 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 ANKRD66B4E2M5 251 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 C10orf142B7Z368 130 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 SLC7A4O43246 635 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 RAD51CO43502 376 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 AP1G1O43747 822 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 USP12O75317 370 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 RPP40O75818 363 aaKnown RBP10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 SEMA4FO95754 770 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 AP2A1O95782 977 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 NDST3O95803 873 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 GAS8O95995 478 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 TRBC1P01850 177 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 PIRTP0C851 137 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 CA4P22748 312 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 XPAP23025 273 aaPredicted RBP10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 HNF1BP35680 557 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 GRIA1P42261 906 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 EPHB1P54762 984 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 PPP2CBP62714 309 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 POLR2LP62875 67 aaKnown RBP10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 PPP2CAP67775 309 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 FAM193AP78312 1265 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 BASP1P80723 227 aaKnown RBP10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 DR1Q01658 176 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 CCDC15Q0P6D6 951 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 RALGDSQ12967 914 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 SEMA5AQ13591 1074 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 PTK6Q13882 451 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 PPP1R7Q15435 360 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 SLC1A5Q15758 541 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 SIRPB2Q5JXA9 342 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 C4orf22Q6V702 233 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 RANBP10Q6VN20 620 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 TSPAN33Q86UF1 283 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 JAMLQ86YT9 394 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 OR2T34Q8NGX1 318 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 RAB7BQ96AH8 199 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 RMDN1Q96DB5 314 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 IFT43Q96FT9 208 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 SPACA7Q96KW9 195 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 RUNDC3BQ96NL0 473 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 TRIM51Q9BSJ1 452 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 B4GALT6Q9UBX8 382 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 ZFR2Q9UPR6 939 aaKnown RBP10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 R4GN57 208 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 CEP192Q8TEP8 1941 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 CUL9Q8IWT3 2517 aa10.76□□□□□ -0.69
SMARCA4-213ENST00000587988 USP34Q70CQ2 3546 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 TBC1D3DA0A087WVF3 549 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 TBC1D3IA0A087WXS9 549 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 TBC1D3EA0A087X179 549 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 TBC1D3KA0A087X1G2 549 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 TBC1D3FA6NER0 549 aaPredicted RBP10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 NPIPB15A6NHN6 443 aaPredicted RBP10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 TBC1D3LB9A6J9 549 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 NEMP1O14524 444 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 RNGTTO60942 597 aaKnown RBP10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 NDUFS2O75306 463 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 PCDH8O95206 1070 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 EPOP01588 193 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 TBC1D3HP0C7X1 549 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 LHCGRP22888 699 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 IVDP26440 423 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 MMP12P39900 470 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 GRIA4P48058 902 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 RPL26P61254 145 aaKnown RBP10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 RPL6Q02878 288 aaKnown RBP10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 DHX34Q14147 1143 aaKnown RBP10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 CDKN3Q16667 212 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 TMEM52BQ4KMG9 183 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 ANKRD22Q5VYY1 191 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 SEL1L3Q68CR1 1132 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 TBC1D3GQ6DHY5 549 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 TBC1D3CQ6IPX1 549 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 DENND5AQ6IQ26 1287 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 SLC41A1Q8IVJ1 513 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 TMEFF1Q8IYR6 380 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms