RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 RNF157Q96PX1 679 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 PANX2Q96RD6 677 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 WRAP53Q9BUR4 548 aaKnown RBP14.95□□□□□ -0.02
SS18-212ENST00000579061 LUC7LQ9NQ29 371 aaKnown RBP14.95□□□□□ -0.02
SS18-212ENST00000579061 SCUBE2Q9NQ36 999 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 MSRB2Q9Y3D2 182 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 PCDHGA1Q9Y5H4 931 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 ENC1O14682 589 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 MATN3O15232 486 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 C1SP09871 688 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 CDK4P11802 303 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 FECHP22830 423 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 CES1P23141 567 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 DGKAP23743 735 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 NFKBIAP25963 317 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 IGFALSP35858 605 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 FZD2Q14332 565 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 PARGQ86W56 976 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 RHOT1Q8IXI2 618 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 EID2Q8N6I1 236 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 HDAC11Q96DB2 347 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 CNDP2Q96KP4 475 aaKnown RBP14.94□□□□□ -0.02
SS18-212ENST00000579061 NSMCE3Q96MG7 304 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 HAUS2Q9NVX0 235 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 DDX56Q9NY93 547 aaKnown RBP14.94□□□□□ -0.02
SS18-212ENST00000579061 MAP1BP46821 2468 aaKnown RBP14.94□□□□□ -0.02
SS18-212ENST00000579061 PLXNB3Q9ULL4 1909 aa14.94□□□□□ -0.02
SS18-212ENST00000579061 A0A0A6YYK5 440 aaPredicted RBP14.93□□□□□ -0.02
SS18-212ENST00000579061 LRRD1A4D1F6 860 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 NEMP2A6NFY4 417 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 H3BM21 787 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 PIAS2O75928 621 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 CSF2P04141 144 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 C6P13671 934 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 NME1P15531 152 aaKnown RBP14.93□□□□□ -0.02
SS18-212ENST00000579061 SPINK2P20155 84 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 LIG3P49916 1009 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 PEX5P50542 639 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 THOP1P52888 689 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 RALGDSQ12967 914 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 PDE1CQ14123 709 aaPredicted RBP14.93□□□□□ -0.02
SS18-212ENST00000579061 LRRC14Q15048 493 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 SPA17Q15506 151 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 ALG1LQ6GMV1 187 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 LIPIQ6XZB0 460 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 DPPA4Q7L190 304 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 GAS2L3Q86XJ1 694 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 SLC25A45Q8N413 288 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 PAF1Q8N7H5 531 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 PNPLA1Q8N8W4 532 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 ZNF830Q96NB3 372 aaPredicted RBP14.93□□□□□ -0.02
SS18-212ENST00000579061 POLR1EQ9GZS1 481 aaKnown RBP14.93□□□□□ -0.02
SS18-212ENST00000579061 NOD2Q9HC29 1040 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 KCTD5Q9NXV2 234 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 KLK13Q9UKR3 277 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 PHTF1Q9UMS5 762 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 PCDHGC4Q9Y5F7 938 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 PCDHA13Q9Y5I0 950 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 CSNK1G3Q9Y6M4 447 aa14.93□□□□□ -0.02
SS18-212ENST00000579061 C3orf70A6NLC5 250 aaPredicted RBP14.92□□□□□ -0.02
SS18-212ENST00000579061 LZTS3O60299 673 aaPredicted RBP14.92□□□□□ -0.02
SS18-212ENST00000579061 SDC3O75056 442 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 ZFXP17010 805 aaPredicted RBP14.92□□□□□ -0.02
SS18-212ENST00000579061 MAXP61244 160 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 GBE1Q04446 702 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 SLC10A2Q12908 348 aaPredicted RBP14.92□□□□□ -0.02
SS18-212ENST00000579061 ZNF211Q13398 564 aaPredicted RBP14.92□□□□□ -0.02
SS18-212ENST00000579061 IRF4Q15306 451 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 HS1BP3Q53T59 392 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 SLC9A4Q6AI14 798 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 TMPRSS7Q7RTY8 843 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 TMTC1Q8IUR5 882 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 GALNT15Q8N3T1 639 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 OR4C6Q8NH72 309 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 BTN2A2Q8WVV5 523 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 GATA6Q92908 595 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 TBATAQ96M53 351 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 TMEM121BQ9BXQ6 578 aaPredicted RBP14.92□□□□□ -0.02
SS18-212ENST00000579061 MAK16Q9BXY0 300 aaKnown RBP14.92□□□□□ -0.02
SS18-212ENST00000579061 NT5MQ9NPB1 228 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 MBNL1Q9NR56 388 aaKnown RBP14.92□□□□□ -0.02
SS18-212ENST00000579061 DNAJC28Q9NX36 388 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 DTLQ9NZJ0 730 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 COQ6Q9Y2Z9 468 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 PPIL1Q9Y3C6 166 aa14.92□□□□□ -0.02
SS18-212ENST00000579061 EPG5Q9HCE0 2579 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 SPEGQ15772 3267 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 TTC24A2A3L6 582 aaPredicted RBP14.91□□□□□ -0.02
SS18-212ENST00000579061 TMEM8BA6NDV4 472 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 SCAMP1O15126 338 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 PSTPIP1O43586 416 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 SPOPO43791 374 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 CPP00450 1065 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 ELFN1P0C7U0 828 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 ALPPL2P10696 532 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 CYP2A6P11509 494 aaPredicted RBP14.91□□□□□ -0.02
SS18-212ENST00000579061 CCNB1P14635 433 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 CKMT2P17540 419 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 COMTP21964 271 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 NOP2P46087 812 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms