RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 ZNF449Q6P9G9 518 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 ZNF783Q6ZMS7 281 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 SH2D5Q6ZV89 423 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 CYS1Q717R9 158 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 CCDC117Q8IWD4 279 aaPredicted RBP20.41■□□□□ 0.86
SMG8-203ENST00000578922 ST13P5Q8NFI4 369 aaPredicted RBP20.41■□□□□ 0.86
SMG8-203ENST00000578922 TADA1Q96BN2 335 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 ALG14Q96F25 216 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 ZNF570Q96NI8 536 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 CDH22Q9UJ99 828 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 K7ERQ8 282 aa20.4■□□□□ 0.86
SMG8-203ENST00000578922 LIN7AO14910 233 aaPredicted RBP20.4■□□□□ 0.86
SMG8-203ENST00000578922 CCDC22O60826 627 aa20.4■□□□□ 0.86
SMG8-203ENST00000578922 PEX11AO75192 247 aa20.4■□□□□ 0.86
SMG8-203ENST00000578922 CBX6O95503 412 aa20.4■□□□□ 0.86
SMG8-203ENST00000578922 CYBBP04839 570 aa20.4■□□□□ 0.86
SMG8-203ENST00000578922 SERPINF2P08697 491 aa20.4■□□□□ 0.86
SMG8-203ENST00000578922 DUSP6Q16828 381 aa20.4■□□□□ 0.86
SMG8-203ENST00000578922 ESRP1Q6NXG1 681 aaKnown RBP20.4■□□□□ 0.86
SMG8-203ENST00000578922 SCUBE2Q9NQ36 999 aa20.4■□□□□ 0.86
SMG8-203ENST00000578922 ZNF180Q9UJW8 692 aa20.4■□□□□ 0.86
SMG8-203ENST00000578922 TCAF1Q9Y4C2 921 aa20.4■□□□□ 0.86
SMG8-203ENST00000578922 BPTFQ12830 3046 aa20.4■□□□□ 0.86
SMG8-203ENST00000578922 SZT2Q5T011 3432 aa20.4■□□□□ 0.86
SMG8-203ENST00000578922 WDR91A4D1P6 747 aa20.39■□□□□ 0.86
SMG8-203ENST00000578922 NEDD8-MDP1E9PL57 170 aa20.39■□□□□ 0.86
SMG8-203ENST00000578922 KRT37O76014 449 aa20.39■□□□□ 0.86
SMG8-203ENST00000578922 PRKCGP05129 697 aa20.39■□□□□ 0.86
SMG8-203ENST00000578922 SNRPAP09012 282 aaKnown RBP20.39■□□□□ 0.86
SMG8-203ENST00000578922 SERPINH1P50454 418 aaKnown RBP20.39■□□□□ 0.86
SMG8-203ENST00000578922 RFTN1Q14699 578 aaPredicted RBP20.39■□□□□ 0.86
SMG8-203ENST00000578922 ELMSAN1Q6PJG2 1045 aa20.39■□□□□ 0.86
SMG8-203ENST00000578922 MARK2Q7KZI7 788 aaKnown RBP20.39■□□□□ 0.86
SMG8-203ENST00000578922 KCNMB4Q86W47 210 aa20.39■□□□□ 0.86
SMG8-203ENST00000578922 ATXN7L3BQ96GX2 97 aa20.39■□□□□ 0.86
SMG8-203ENST00000578922 C12orf65Q9H3J6 166 aaKnown RBP20.39■□□□□ 0.86
SMG8-203ENST00000578922 IARS2Q9NSE4 1012 aaKnown RBP20.39■□□□□ 0.86
SMG8-203ENST00000578922 WNT6Q9Y6F9 365 aa20.39■□□□□ 0.86
SMG8-203ENST00000578922 HMX2A2RU54 273 aa20.39■□□□□ 0.85
SMG8-203ENST00000578922 ZNF197O14709 1029 aa20.39■□□□□ 0.85
SMG8-203ENST00000578922 ATXN1LP0C7T5 689 aaKnown RBP20.39■□□□□ 0.85
SMG8-203ENST00000578922 PIRTP0C851 137 aa20.39■□□□□ 0.85
SMG8-203ENST00000578922 PYGBP11216 843 aa20.39■□□□□ 0.85
SMG8-203ENST00000578922 ABCG1P45844 678 aa20.39■□□□□ 0.85
SMG8-203ENST00000578922 ARFIP2P53365 341 aa20.39■□□□□ 0.85
SMG8-203ENST00000578922 CDK18Q07002 472 aa20.39■□□□□ 0.85
SMG8-203ENST00000578922 CMPK2Q5EBM0 449 aa20.39■□□□□ 0.85
SMG8-203ENST00000578922 LGSNQ5TDP6 509 aa20.39■□□□□ 0.85
SMG8-203ENST00000578922 PACS1Q6VY07 963 aa20.39■□□□□ 0.85
SMG8-203ENST00000578922 TRIM42Q8IWZ5 723 aa20.39■□□□□ 0.85
SMG8-203ENST00000578922 LRRC42Q9Y546 428 aa20.39■□□□□ 0.85
SMG8-203ENST00000578922 INSIG1O15503 277 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 KRT38O76015 456 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 HAUS5O94927 633 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 ZNF77Q15935 545 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 MPP7Q5T2T1 576 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 FAM91A1Q658Y4 838 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 RFWD2Q8NHY2 731 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 GDF15Q99988 308 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 ARNT2Q9HBZ2 717 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 ABCB8Q9NUT2 735 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 TXNDC16Q9P2K2 825 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 LOC285095A0A1B0GVY8 99 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 VAPBO95292 243 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 TPBGLP0DKB5 382 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 KRT72Q14CN4 511 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 RAB30Q15771 203 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 CNGA3Q16281 694 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 RARS2Q5T160 578 aaKnown RBP20.38■□□□□ 0.85
SMG8-203ENST00000578922 ATXN7L2Q5T6C5 722 aaPredicted RBP20.38■□□□□ 0.85
SMG8-203ENST00000578922 DCAF4L2Q8NA75 395 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 FIBINQ8TAL6 211 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 NUDCD1Q96RS6 583 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 BBS2Q9BXC9 721 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 TM6SF2Q9BZW4 377 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 KIAA1522Q9P206 1035 aaPredicted RBP20.38■□□□□ 0.85
SMG8-203ENST00000578922 HEY2Q9UBP5 337 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 DCTN4Q9UJW0 460 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 PCDHGC4Q9Y5F7 938 aa20.38■□□□□ 0.85
SMG8-203ENST00000578922 RHOAP61586 193 aa20.37■□□□□ 0.85
SMG8-203ENST00000578922 TEDDM1Q5T9Z0 273 aa20.37■□□□□ 0.85
SMG8-203ENST00000578922 ALG1LQ6GMV1 187 aa20.37■□□□□ 0.85
SMG8-203ENST00000578922 STRA8Q7Z7C7 330 aa20.37■□□□□ 0.85
SMG8-203ENST00000578922 BLOC1S5Q8TDH9 187 aa20.37■□□□□ 0.85
SMG8-203ENST00000578922 PTPRN2Q92932 1015 aa20.37■□□□□ 0.85
SMG8-203ENST00000578922 NSL1Q96IY1 281 aa20.37■□□□□ 0.85
SMG8-203ENST00000578922 BTBD10Q9BSF8 475 aa20.37■□□□□ 0.85
SMG8-203ENST00000578922 C2orf49Q9BVC5 232 aaPredicted RBP20.37■□□□□ 0.85
SMG8-203ENST00000578922 DCLRE1BQ9H816 532 aa20.37■□□□□ 0.85
SMG8-203ENST00000578922 INTS6Q9UL03 887 aaKnown RBP20.37■□□□□ 0.85
SMG8-203ENST00000578922 SMAD6O43541 496 aaKnown RBP20.36■□□□□ 0.85
SMG8-203ENST00000578922 CR2P20023 1033 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 TEX9Q8N6V9 391 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 OR6K2Q8NGY2 324 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 PDCD6IPQ8WUM4 868 aaKnown RBP20.36■□□□□ 0.85
SMG8-203ENST00000578922 SKA1Q96BD8 255 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 PTCD3Q96EY7 689 aaKnown RBP20.36■□□□□ 0.85
SMG8-203ENST00000578922 FEM1CQ96JP0 617 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 RPL10LQ96L21 214 aaKnown RBP20.36■□□□□ 0.85
SMG8-203ENST00000578922 LRRC3BQ96PB8 259 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms