RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 UBP1Q9NZI7 540 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TPX2Q9ULW0 747 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PCDHB9Q9Y5E1 797 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SCN8AQ9UQD0 1980 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 A0A1W2PP55 124 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 LRRC72A6NJI9 287 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 UPK3BL1B0FP48 263 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ANKRD66B4E2M5 251 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 UPK3BL2E5RIL1 263 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 NEMP1O14524 444 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TRAFD1O14545 582 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 DNALI1O14645 258 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 AXIN1O15169 862 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RAD51CO43502 376 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SLU7O95391 586 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 AP2A1O95782 977 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 MMP2P08253 660 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ZSCAN5DPP0CG00 497 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ADRB3P13945 408 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PTGIRP43119 386 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 WNT3AP56704 352 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CSTF1Q05048 431 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CNTN1Q12860 1018 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TRAF2Q12933 501 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 UGP2Q16851 508 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ZNF528Q3MIS6 628 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FAXCQ5TGI0 409 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 KDELC1Q6UW63 502 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SLC36A4Q6YBV0 504 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PARS2Q7L3T8 475 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 HOOK3Q86VS8 718 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 LONP2Q86WA8 852 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PPIL6Q8IXY8 311 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TAB3Q8N5C8 712 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PDCD7Q8N8D1 485 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 DNAAF3Q8N9W5 541 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 LPCAT1Q8NF37 534 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 MDGA1Q8NFP4 955 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SPOCK2Q92563 424 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TADA1Q96BN2 335 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ECHDC3Q96DC8 303 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 OXNAD1Q96HP4 312 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 MRGPRX2Q96LB1 330 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ERP44Q9BS26 406 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FICDQ9BVA6 458 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FRMD8Q9BZ67 464 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 BTBD1Q9H0C5 482 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 KDM4CQ9H3R0 1056 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CD248Q9HCU0 757 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ITM2CQ9NQX7 267 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 HACD3Q9P035 362 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SARDHQ9UL12 918 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CHKBQ9Y259 395 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 NEU2Q9Y3R4 380 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ZNF106Q9H2Y7 1883 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 DMDP11532 3685 aa11.35□□□□□ -0.59
CDK5RAP3-210ENST00000578733 DOCK9Q9BZ29 2069 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 LOC285095A0A1B0GVY8 99 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 K7ESF4 209 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 AP1G1O43747 822 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FZD6O60353 706 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 NDUFS2O75306 463 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 GJB3O75712 270 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SUN1O94901 812 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ITIH2P19823 946 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 P2RY2P41231 377 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TPMTP51580 245 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CAV1Q03135 178 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CDH17Q12864 832 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 LAMB3Q13751 1172 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ARHGEF7Q14155 803 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 NUMA1Q14980 2115 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 POM121L1PQ3SYA9 428 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 IZUMO3Q5VZ72 239 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 KDELC2Q7Z4H8 507 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 WDR5BQ86VZ2 330 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 KLHDC8BQ8IXV7 354 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 GLIS1Q8NBF1 620 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CXorf40AQ8TE69 158 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ARRDC3Q96B67 414 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SCRN2Q96FV2 425 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TRIM51Q9BSJ1 452 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 MLPHQ9BV36 600 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TPSD1Q9BZJ3 242 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SEMA4AQ9H3S1 761 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 XAB2Q9HCS7 855 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 USP36Q9P275 1121 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CYP8B1Q9UNU6 501 aa11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TP53BP1Q12888 1972 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-210ENST00000578733 A0A0J9YYE9 177 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CAPN8A6NHC0 703 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MAP3K13O43283 966 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TSPAN6O43657 245 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 HEXIM1O94992 359 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 IGLV3-19P01714 112 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TRBC1P01850 177 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ZNF30P17039 623 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CD6P30203 668 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CNR2P34972 360 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms