RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ZNF467Q7Z7K2 595 aaPredicted RBP15.74■□□□□ 0.11
NUP88-207ENST00000573584 CCDC117Q8IWD4 279 aaPredicted RBP15.74■□□□□ 0.11
NUP88-207ENST00000573584 OR9I1Q8NGQ6 314 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 TMIGD2Q96BF3 282 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 MRM3Q9HC36 420 aaKnown RBP15.74■□□□□ 0.11
NUP88-207ENST00000573584 RBM22Q9NW64 420 aaKnown RBP eCLIP15.74■□□□□ 0.114e-7■■■■■ 29.9
NUP88-207ENST00000573584 TMEM181Q9P2C4 612 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 RSL24D1Q9UHA3 163 aaKnown RBP15.74■□□□□ 0.11
NUP88-207ENST00000573584 TRAF6Q9Y4K3 522 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 LTA4HP09960 611 aaKnown RBP15.74■□□□□ 0.11
NUP88-207ENST00000573584 C6orf10Q5SRN2 563 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 ZBTB49Q6ZSB9 765 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 DHFR2Q86XF0 187 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 SLC39A3Q9BRY0 314 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 OLAHQ9NV23 265 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 IRAK4Q9NWZ3 460 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.74■□□□□ 0.11
NUP88-207ENST00000573584 IPO11Q9UI26 975 aaKnown RBP15.74■□□□□ 0.11
NUP88-207ENST00000573584 ATP6AP2A0A1C7CYW4 349 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 H3BNH8 94 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 ATP6AP2O75787 350 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 SRP72O76094 671 aaKnown RBP15.73■□□□□ 0.11
NUP88-207ENST00000573584 RBP1P09455 135 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 CKMT2P17540 419 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 YWHAQP27348 245 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 HMBOX1Q6NT76 420 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 RANBP10Q6VN20 620 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 DQX1Q8TE96 717 aaKnown RBP15.73■□□□□ 0.11
NUP88-207ENST00000573584 CDCA5Q96FF9 252 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 DUS3LQ96G46 650 aaKnown RBP15.73■□□□□ 0.11
NUP88-207ENST00000573584 RMND5BQ96G75 393 aaPredicted RBP15.73■□□□□ 0.11
NUP88-207ENST00000573584 SMARCD1Q96GM5 515 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 UHRF1Q96T88 793 aaPredicted RBP15.73■□□□□ 0.11
NUP88-207ENST00000573584 SLC39A8Q9C0K1 460 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 PNPLA3Q9NST1 481 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 CNOT6Q9ULM6 557 aaKnown RBP15.73■□□□□ 0.11
NUP88-207ENST00000573584 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.73■□□□□ 0.11
NUP88-207ENST00000573584 PDCD11Q14690 1871 aaKnown RBP15.73■□□□□ 0.11
NUP88-207ENST00000573584 TREHO43280 583 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 TIPRLO75663 272 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 STAMBPO95630 424 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 HLA-DQB2P05538 268 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 SLC7A2P52569 658 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 FAM219BQ5XKK7 198 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 CLEC6AQ6EIG7 209 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 FAM45BPQ6NSW5 357 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 KIAA0408Q6ZU52 694 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 TMEM86AQ8N2M4 240 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 PNPLA1Q8N8W4 532 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 FAM45AQ8TCE6 357 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 MRGPRX2Q96LB1 330 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 PRKD2Q9BZL6 878 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 ABHD16BQ9H3Z7 469 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 NEU3Q9UQ49 428 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 PTCH2Q9Y6C5 1203 aa15.73■□□□□ 0.11
NUP88-207ENST00000573584 ZNF839A8K0R7 811 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 HTRA2O43464 458 aaPredicted RBP15.72■□□□□ 0.11
NUP88-207ENST00000573584 F2P00734 622 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 HSPA8P11142 646 aaKnown RBP15.72■□□□□ 0.11
NUP88-207ENST00000573584 PCSK7Q16549 785 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 MAP7D1Q3KQU3 841 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 PITRM1Q5JRX3 1037 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 IQSEC1Q6DN90 963 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 GAB3Q8WWW8 586 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 RANBP9Q96S59 729 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 hCG_2014768A0A024R1R8 64 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 MEIS3P2A8K0S8 358 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 AKAP10O43572 662 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 TSPAN8P19075 237 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 GJA5P36382 358 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 ALDH3B2P48448 385 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 NOMO2Q5JPE7 1267 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 ANKRD49Q8WVL7 239 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 MAML3Q96JK9 1138 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 UPF3AQ9H1J1 476 aaKnown RBP15.72■□□□□ 0.11
NUP88-207ENST00000573584 FBRSL1Q9HCM7 1045 aaKnown RBP15.72■□□□□ 0.11
NUP88-207ENST00000573584 NDFIP2Q9NV92 336 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 CDH9Q9ULB4 789 aa15.72■□□□□ 0.11
NUP88-207ENST00000573584 UBFD1O14562 309 aaKnown RBP15.71■□□□□ 0.11
NUP88-207ENST00000573584 SUPT7LO94864 414 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 GRIA3P42263 894 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 CLCNKBP51801 687 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 GALNT1Q10472 559 aaPredicted RBP15.71■□□□□ 0.11
NUP88-207ENST00000573584 DCTN2Q13561 401 aaKnown RBP15.71■□□□□ 0.11
NUP88-207ENST00000573584 ACAP2Q15057 778 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 LARP4Q71RC2 724 aaKnown RBP eCLIP15.71■□□□□ 0.11
NUP88-207ENST00000573584 LPCAT2Q7L5N7 544 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 SLC22A9Q8IVM8 553 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 CANT1Q8WVQ1 401 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 IRGQQ8WZA9 623 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 PPP1R2P1Q96PQ5 205 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 TINF2Q9BSI4 451 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 PLOD2O00469 737 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 PFDN1O60925 122 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 CYP2C18P33260 490 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 CDK9P50750 372 aaKnown RBP15.71■□□□□ 0.11
NUP88-207ENST00000573584 AFF1P51825 1210 aaKnown RBP15.71■□□□□ 0.11
NUP88-207ENST00000573584 PRKCQQ04759 706 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 NHSL2Q5HYW2 709 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 C8orf82Q6P1X6 216 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms