RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 KSR1Q8IVT5 923 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 SFRP1Q8N474 314 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 XXYLT1Q8NBI6 393 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 OR9A1PQ8NGU1 263 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 PIGOQ8TEQ8 1089 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 EDAQ92838 391 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 FBXO32Q969P5 355 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 ZNF764Q96H86 408 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 EXOC2Q96KP1 924 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 TEX12Q9BXU0 123 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 GON7Q9BXV9 100 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 RAD21L1Q9H4I0 556 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CCDC86Q9H6F5 360 aaKnown RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 ITGA11Q9UKX5 1188 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 INVSQ9Y283 1065 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 KLHL20Q9Y2M5 609 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 REXO2Q9Y3B8 237 aaKnown RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 BACE2Q9Y5Z0 518 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 RHPN2P1A8MT19 583 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 PER2O15055 1255 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CSTBP04080 98 aaKnown RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 CHRM5P08912 532 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 CD46P15529 392 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 HOXA11P31270 313 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 GRM5P41594 1212 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 POU3F4P49335 361 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 KCNJ10P78508 379 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 MRPS9P82933 396 aaKnown RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 DSC2Q02487 901 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 ZNF699Q32M78 642 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 PKDCCQ504Y2 493 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 LRRC55Q6ZSA7 311 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 KIRREL3Q8IZU9 778 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 AKR7LQ8NHP1 331 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 METTL6Q8TCB7 284 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 BPIFB1Q8TDL5 484 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 LZICQ8WZA0 190 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 PEX13Q92968 403 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 ZNF653Q96CK0 615 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 SLC47A1Q96FL8 570 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 TXN2Q99757 166 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 THUMPD3Q9BV44 507 aaKnown RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 RUSC1Q9BVN2 902 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 KLHL4Q9C0H6 718 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 INTS2Q9H0H0 1204 aaKnown RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 TFB2MQ9H5Q4 396 aaKnown RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 COPS7BQ9H9Q2 264 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 ABI2Q9NYB9 513 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 GMIPQ9P107 970 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 MTCH2Q9Y6C9 303 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 RAB19A4D1S5 217 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 C1QTNF3-AMACRE9PGA6 284 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 HAS3O00219 553 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 PHF2O75151 1096 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 DLDP09622 509 aaKnown RBP6.71□□□□□ -1.33
SMG1-217ENST00000569764 MAPKAPK2P49137 400 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 GATMP50440 423 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 MC1RQ01726 317 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 ADAM15Q13444 863 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 SF3B4Q15427 424 aaKnown RBP eCLIP6.71□□□□□ -1.33
SMG1-217ENST00000569764 ZCWPW2Q504Y3 356 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 BEND6Q5SZJ8 279 aaPredicted RBP6.71□□□□□ -1.33
SMG1-217ENST00000569764 CENPPQ6IPU0 288 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 SLC25A24Q6NUK1 477 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 WDR93Q6P2C0 686 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 SLFN11Q7Z7L1 901 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 PSTKQ8IV42 348 aaKnown RBP6.71□□□□□ -1.33
SMG1-217ENST00000569764 CCDC13Q8IYE1 715 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 GPD1LQ8N335 351 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 TRPV1Q8NER1 839 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 ADAMTS10Q9H324 1103 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 TASP1Q9H6P5 420 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 MARK1Q9P0L2 795 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 TRIM10Q9UDY6 481 aa6.71□□□□□ -1.33
SMG1-217ENST00000569764 LOC105371267A0A1B0GV96 52 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 TTC26A0AVF1 554 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 HTR3EA5X5Y0 456 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 HMX3A6NHT5 357 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 ANKRD65E5RJM6 399 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 E9PBE3 544 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 CYB561D2O14569 222 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 PEX1O43933 1283 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 SLITRK3O94933 977 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 SLC9A1P19634 815 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 CFL1P23528 166 aaKnown RBP6.71□□□□□ -1.34
SMG1-217ENST00000569764 BMI1P35226 326 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 CPA2P48052 419 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 ARRB1P49407 418 aaPredicted RBP6.71□□□□□ -1.34
SMG1-217ENST00000569764 CALCOCO2Q13137 446 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 TRIM25Q14258 630 aaKnown RBP6.71□□□□□ -1.34
SMG1-217ENST00000569764 FIGNQ5HY92 759 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 TCTE1Q5JU00 501 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 SNX31Q8N9S9 440 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 DNAAF3Q8N9W5 541 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 SDCCAG3Q96C92 435 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 P2RY13Q9BPV8 354 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 TTYH3Q9C0H2 523 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 EPB41L5Q9HCM4 733 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 RBAKQ9NYW8 714 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms